Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 233 3e-55 seq1 187 4e-41 seq4 136 6e-26 seq2 113 6e-19 seq5 89.7 7e-12 >seq6 Length=2565775 Score = 233 bits (258), Expect = 3e-55 Identities = 378/539 (70%), Gaps = 21/539 (4%) Strand=Plus/Minus Query 259647 TGGTCTCGGACGAGTTGGTGGCCTTTGTCGCCGAGCACAAGGAGGTCCTCGACGCTGCCA 259706 |||||||||| ||| || | ||||| | ||||||| |||||||||| ||||| Sbjct 1607637 TGGTCTCGGAGGAGGTGTACAACATTGTCCAGGCCAACAAGGATGTCCTCGACGGTGCCA 1607578 Query 259707 TCTGCCACGGCCGAGACTTTGGCTACTCGTACTTTGGTCTGGCGACC-TTGCGCCGGTCC 259765 || | ||| ||| ||||||| |||| |||||||| | |||| ||| || | || Sbjct 1607577 TCATCTACGACCGTGACTTTGCCTACAACTACTTTGGCTTCAAGACCCTTGAGC-GTTCG 1607519 Query 259766 TACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTC 259825 ||||| ||| | || | |||| |||||| |||||| | |||||||||||||| Sbjct 1607518 TACCTCCTCAAGATCAACGGCAAGGTCGCCGAGCGCCCCCAGCACATGCTCATGCGTGTG 1607459 Query 259826 GCCCTTGGCCATTATGGGTTTGCCGACGTCGACAATGCGCTGGAGCACGTGCTCGCCACC 259885 ||| | || ||| | ||| |||||| | ||| | || |||| ||| Sbjct 1607458 GCCGTCGG----TAT--------CCACGGCGACAACA---TTGAGAAGGTCCTCGAGACC 1607414 Query 259886 TACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGC 259945 ||| | ||||||| ||| | |||||| ||| | || || ||||| || | || Sbjct 1607413 TACAACCTCATGTCGGAGCGCTACTTCACCCACGCGTCTCCTACCCTCTTCAACTCGGGT 1607354 Query 259946 ACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAG 260005 || || | | | |||| ||||||||||| || | | |||||||| ||| ||||| || Sbjct 1607353 ACCCCCCACGCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAAGGACGACTCGATTGAC 1607294 Query 260006 GGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGT 260065 |||||||| ||||| |||||| ||||| | ||||||||| | ||||| || |||||| Sbjct 1607293 GGCATCTACGACACCCTCAAGACCTGCGCCCAGATCTCCAAGACTGCCGGTGGTATCGGT 1607234 Query 260066 TTTGCCGCA--CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGT 260123 | || || ||||| | || ||| |||| | ||| | || |||||||||||| | | Sbjct 1607233 CT--CCACATCCACAACATTCGTGCCAAGGGCTCGTACATTGCCGGCACCAACGGCTACT 1607176 Query 260124 CCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | |||||| | || |||||||| |||| | ||| ||| || || |||||||||||| Sbjct 1607175 CGAACGGCATCGTCCCCATGCTCCGCGCGTACGACGCCACTGCTCGTTACGTCGACCAG 1607117 Score = 118 bits (130), Expect = 2e-20 Identities = 172/238 (72%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 263173 GATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC-CAACCGGGTGACCATTGATAT 263231 || |||||||| ||| |||||| || |||||| | | || || || | || || | Sbjct 1605955 GACCTCAAGGCCATCTACAAGACTGTCTGGGAGATTTCGCAGAAGGCTGTC-ATCGACCT 1605897 Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291 || |||||||| | ||| |||||||| |||||||||||| | |||||||| | Sbjct 1605896 CGCTGCCGACCGTGGTGCCTTCATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCCAA 1605837 Query 263292 CCCGACGGCCGAG-AGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 ||| | | | ||| |||||||||||||| ||| | ||| || || ||||||| Sbjct 1605836 CCCCTCCTTCTCGCAGC-TCACGTCGATGCACTTCTACGGCTGGAAGCGTGGTCTCAAGA 1605778 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408 |||| ||||| || |||||||| || || ||||||||||| || |||||| |||| Sbjct 1605777 CTGGTGCCTACTACCTCCGCACCCGTCCTGCAGCCAACGCCATCCAGTTCACCATCGA 1605720 Score = 91.5 bits (100), Expect = 2e-12 Identities = 106/140 (76%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 333009 AGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG-ATCAAC--CCTTT 333065 |||| ||||||||||||||||| |||||||| ||||| ||||||| ||| | ||||| Sbjct 621698 AGTCTGCCTCGTCGAGGATGATAATCTTGTGCCGCCCAGGCGGCAGCGTCACCTTCCTTT 621757 Query 333066 TCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGT 333125 ||| | ||||| | || | ||| ||||| | || |||||||| ||||||| Sbjct 621758 ---GGGCAAACAGCTTGATCTTATTCCTCACAACGTCGATACCACGCTCGTCGGACGCGT 621814 Query 333126 TGAGTTCGAGCACGGCCTCG 333145 |||| |||||||| ||||| Sbjct 621815 TGAGCTCGAGCACACCCTCG 621834 Score = 87.8 bits (96), Expect = 3e-11 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 1816049 CCGTCGCCGCCATATGCAAACTGGACAATGTCGCCGTTGGCGTTGCGCACGAGGCCGCCG 1816108 ||||| |||| || ||||||| ||||| ||| | | |||||| || |||| || Sbjct 1568513 CCGTCCTCGCCGTACAGGAACTGGATGATGTCACCGCTCGAGTTGCGGACAGTGCCGTCG 1568572 Query 1816109 CGCTTGATCTGCAGGCTCTCCATCGACTTGATGCACCGGCGCTGGATGTAGCCACGTCCG 1816168 || || |||| |||||| | ||||| | || ||||||||||| ||| | || Sbjct 1568573 TATCCGACCTTCAGGTCCTCCATTGCCTTGACGAGACGACGCTGGATGTAACCAGTTTCG 1568632 Query 1816169 GCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACATC 1816228 || |||||||| || ||||||| || ||||| || || || || ||| || || | | Sbjct 1568633 GCAGTCTTGACTGCAGTGTCGATAAGACCCTCACGACCACCCATTGCGTGGAAGAAGAAC 1568692 Query 1816229 TCGCGCGAGTTGAGGCCGCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGG 1816284 || | | |||| || || ||||||||| || ||||| || |||||| Sbjct 1568693 TCCTGAGGAGTGAGACCACGGAGGTACGAGTTCTCGACGAAGCCTCGAGACTCGGG 1568748 >seq1 Length=5192464 Score = 187 bits (206), Expect = 4e-41 Identities = 199/257 (77%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||| |||||||||| |||||| | ||||| ||| |||| | || || || Sbjct 4742755 AGATCATCAAGGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCT 4742814 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||| Sbjct 4742815 CGCTCATCGGCATGAACGCCA-AGCTCATGTGCCAGTACATTG-AGTTTGTTGCCGACCG 4742872 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 |||||||| || || ||| | || |||| |||| || ||||||| ||| | | Sbjct 4742873 CCTGCTCGTCGCCCTTGGCAAC-GACAAGCTCTACAACTCGACCAACCCCTTCGACTTCA 4742931 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC---GAGTA 1456757 ||||| ||||||||||| |||||||| ||||||| ||||| | |||||| | | || Sbjct 4742932 TGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA--GTCGCGTGTCTCGGCCTA 4742989 Query 1456758 CGCCAAGGCCGGCGTCA 1456774 | ||||| | || |||| Sbjct 4742990 CTCCAAGTCGGGTGTCA 4743006 Score = 154 bits (170), Expect = 2e-31 Identities = 211/290 (73%), Gaps = 11/290 (4%) Strand=Plus/Plus Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050 || ||||| ||||||||| || || ||||||||||| || ||||||||||| || ||| Sbjct 4742364 TTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTTCTCATC 4742423 Query 1456051 GACACCTACGTCAAGGAC----CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106 ||||| ||| || ||| || | || || ||||||| | ||||| ||||| Sbjct 4742424 GACACGTACATCCGCGACAACGCCCGCCGCGAGT----ACCTCTTCCAGGCCATTGACAC 4742479 Query 1456107 GGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCT 1456166 | || | | | ||| |||||||||||||| | | ||||||| | || || | Sbjct 4742480 CATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCACTGGATCACGGACAAGCGC-T 4742538 Query 1456167 CGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGC 1456225 || | || || ||||| || | | || || || |||||||||||||| ||||||||| Sbjct 4742539 CGTCG-TTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGC 4742597 Query 1456226 AGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || | ||||||| |||||||||||||| ||||||||||||||||| Sbjct 4742598 TCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCT 4742647 Score = 93.3 bits (102), Expect = 6e-13 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| ||||||| || ||||||||||||||| || ||| Sbjct 4742100 GATTTGGCAGATGTAC-AAGAAGGCTCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACC 4742158 Query 1455835 TCGGCGCCGACACGGTCCACTGGG---TGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 ||| | ||||| | |||||| ||| | |||| ||||||| | |||||| Sbjct 4742159 TCGCCCCCGACCTTCACGACTGGGACAACAAGCTCAACGACAACGAGCGTTACTTCATCG 4742218 Query 1455892 AGCACGTCCTCGCCTTTTT 1455910 |||||||||||||||| || Sbjct 4742219 AGCACGTCCTCGCCTTCTT 4742237 >seq4 Length=3026064 Score = 136 bits (150), Expect = 6e-26 Identities = 182/251 (73%), Gaps = 14/251 (6%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| || | ||||||||||| ||||||||||| |||||| |||| | | Sbjct 2457757 TCGTACTCTTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACCGGT-----A 2457811 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || |||||| ||||| | ||| | |||||||| || |||||| |||| || ||| Sbjct 2457812 TC-TCGAACAAGGCCATGGCCATCCTCAACTCGTTCGTTGCCGACATCTTCGAGCGTATC 2457870 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCG 725071 | ||||||||| || || |||| | ||| | ||| || ||| |||| Sbjct 2457871 GCCACCGAGGCTT----CCAAGCTCGCTTCGTACAACCACCGCTCGACCATCTCGTCGCG 2457926 Query 725072 CGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTC 725131 ||||||||||||||||| || || ||| | | ||| || || ||| ||||||| |||| Sbjct 2457927 TGAGATCCAGACCGCCGTCCGTCTCATCCTCCCCGGTGAGCTCTCCAAGCACGCCATCTC 2457986 Query 725132 CGAGGGCACCA 725142 |||||||||| Sbjct 2457987 GGAGGGCACCA 2457997 >seq2 Length=3535900 Score = 113 bits (124), Expect = 6e-19 Identities = 104/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 1456182 CGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240 ||||| ||| |||||| ||||||| |||||||| ||||||||| |||| ||||||| Sbjct 2109898 CGGCTGATCGCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATC 2109957 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300 || |||||||||||||| ||||||||||| || ||| | | | | ||||| | ||||| Sbjct 2109958 TTCTGGCTCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCG-AACGAGCTGATCAG 2110016 Query 1456301 TCGCGACGA 1456309 |||||||| Sbjct 2110017 CCGCGACGA 2110025 >seq5 Length=2714734 Score = 89.7 bits (98), Expect = 7e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 724961 CAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC 725020 ||||||| ||||||| ||||||||||||||||| ||| | |||| ||| ||| | Sbjct 1050936 CAACAAGGCCATGTCCATCATGAACTCGTTTGTGGTGGACCTCTTCGAGCGCCTCGTTAT 1050877 Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080 ||||| | ||| || ||||||| | ||| ||| |||||||||| || Sbjct 1050876 GGAGGCTGCCAACCTTGCCAAGATCAACAAGAGGGCCACTATCTCGTCGCGCGAGATACA 1050817 Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| |||| || || ||| | | ||||| || | | ||||||| |||| |||||||| Sbjct 1050816 GACTTCCGTTCGTCTTATCCTCCCGGGCGAGCTCTCGAAGCACGCCATCTCGGAGGGCAC 1050757 Query 725141 CA 725142 || Sbjct 1050756 CA 1050755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810235481620