Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq5 82.4 7e-11 >seq1 Length=5192464 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || |||| || |||||||| || || || Sbjct 4723603 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4723662 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | |||||||||| ||||| ||||| || Sbjct 4723663 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGT 4723721 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||||||| || ||||| | || || || ||||||||||| || || | Sbjct 4723722 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGA 4723781 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 4723782 CGAAGATCTGCAT 4723794 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| ||||||||||| || || || Sbjct 4724059 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAA 4724118 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||| | || |||||||||| |||||| ||| | | | Sbjct 4724119 AATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4724178 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | ||| || || Sbjct 4724179 GTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGAC 4724238 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4724239 AAAGATCTGCAT 4724250 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || || || | || ||||||||||| || ||||| Sbjct 4723375 CTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAA 4723434 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| ||||| ||| | || Sbjct 4723435 GATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 4723493 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | ||||| || || || ||||| || || | Sbjct 4723494 TGTCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGA 4723553 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 4723554 CGAAGATCTGCAT 4723566 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 4723831 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4723890 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | || Sbjct 4723891 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 4723949 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | |||||||| || ||||| | || || | Sbjct 4723950 TGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGA 4724009 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 4724010 CGAAGATCTGCAT 4724022 >seq5 Length=2714734 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 1972281 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1972340 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 1972341 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1972400 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||| || || ||||| | ||||| || || ||||| Sbjct 1972401 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1972448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793543650800