Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 7e-13 seq1 87.8 2e-12 >seq2 Length=3535900 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || | |||||| || | || || | ||||| || || || || Sbjct 2110050 GCACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAACGTAAG 2109991 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| |||||||| || ||||| || ||||| || || ||||| Sbjct 2109990 CCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGGCGAAAGAGCCCGAGAAGAA 2109931 Query 39736 GATGCCTTCTAC 39747 ||||||||| || Sbjct 2109930 GATGCCTTCGAC 2109919 >seq1 Length=5192464 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || || ||||| || | || | ||||| || || ||||| Sbjct 4742705 GCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAG 4742646 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| |||||||| || |||| ||||| || || || ||||| Sbjct 4742645 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAA 4742586 Query 39736 GATGCCTTCTACTGCTGCAAATGCAA 39761 |||||| || || || || || |||| Sbjct 4742585 GATGCCCTCGACGGCAGCGAAAGCAA 4742560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908714136400