Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-14 seq2 84.2 7e-11 >seq1 Length=5192464 Score = 96.9 bits (106), Expect = 1e-14 Identities = 127/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| ||||| || | ||||| |||| ||||| || | || || ||| ||| Sbjct 4742544 TTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTT 4742603 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||||||||||||| | || |||||||| || |||| |||||| ||||| ||||| Sbjct 4742604 -GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAACGA 4742662 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 || ||| || ||||||||| | || |||||| ||||| || |||| |||| Sbjct 4742663 GCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTCTTCACC 4742717 >seq2 Length=3535900 Score = 84.2 bits (92), Expect = 7e-11 Identities = 115/157 (73%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 443716 TCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 |||| ||||| ||| |||||||| | || || ||| |||| ||| |||||||||| Sbjct 2109905 TCGCCTTTGC-GTGCGTCGAAGGCATCTTCTTCTCGGGCT-CTTTCGCCGCCATCTTCTG 2109962 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | | || |||||||| || |||| || || || || ||||| |||||||| || || Sbjct 2109963 GCTCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCCGCGA 2110022 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 |||||| |||| |||||| || || || || ||| Sbjct 2110023 CGAGGGCATGCACACCGACTTTGCGTGCCTGCTGTAC 2110059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335796494450