Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6 158 2e-33 seq1 95.1 2e-14 >seq6 Length=2565775 Score = 158 bits (174), Expect = 2e-33 Identities = 670/1049 (64%), Gaps = 31/1049 (3%) Strand=Plus/Plus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 111112 || || ||||| || ||||| | ||| | || | ||| ||||| || || || || || Sbjct 1606449 TCGGCAAGACCCTGGACACCAAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGAGC- 1606507 Query 111113 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 111169 |||| ||||| || | || ||| ||||| ||| || || |||||||| | | Sbjct 1606508 --CTCAGGAACGGGGTAGTAGTTCCTGGTGATGACCTGGTCGAGGTTCTTGGTAACGACC 1606565 Query 111170 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 || ||||| | || || || | | || | | | ||||| | ||| | Sbjct 1606566 TTGGTGATCTGGTGGAGCTTCTTGAAGTCGTACGAGTTGGTCTCGAAGTCGACGAAGGCA 1606625 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || |||| || || | ||||| ||||| |||||| | | |||||| | Sbjct 1606626 GGGAGAGCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATG 1606685 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| ||| || || || | | || ||||| ||| | Sbjct 1606686 ATCTCAGTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 1606745 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| || ||||||||||||||| | || || ||||| ||||| | | || ||| Sbjct 1606746 TTGGCAGCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATA 1606805 Query 111410 GCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTA 111465 || ||| | | || | | || | |||| ||| ||| | ||||| |||||| Sbjct 1606806 GCGAACCAGAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCCTCACGCTCGTA 1606861 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG--CGTCGGAGAGACCTGGTGCCTTG 111523 ||| ||| || | || |||| ||| | | | |||||| || || || || | Sbjct 1606862 CTTCTCGTACAGCTCCTCGAACTTCTC--CGAGTGGACGTCGGCAAGGCCGGGGCACTCG 1606919 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | || || | || | ||| | || | | ||| || ||||||||||| ||||| || Sbjct 1606920 GCAGGGCACATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGG 1606979 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 ||||| |||| | ||||| || | ||| |||| || | || ||||| | Sbjct 1606980 ATCCAGAGGGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTC 1607039 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | || ||||| || | | ||| |||||||| |||||||| |||| || | | || Sbjct 1607040 AGGTCGAGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCG 1607099 Query 111704 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 ||||| ||| | || | || || || || ||||||| | |||| ||| Sbjct 1607100 G---GACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGC 1607156 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTC 111815 || || | || || | || | || || || || ||| ||||| | |||| | Sbjct 1607157 ATGGGGACGATGCCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCT--TGGCAC 1607214 Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875 | | |||||||| | || ||||| || || ||| ||||| || || || | Sbjct 1607215 GAATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCT 1607274 Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935 | || || | ||||| |||| || ||||| ||||| |||||| |||||||| | Sbjct 1607275 TGAGGGTGTCGTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACG 1607334 Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 111995 ||||||| | || ||||| | ||||||||||| || | ||||| |||| | Sbjct 1607335 ACATCTGGGCGTGGGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGC 1607394 Query 111996 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 | ||||| || ||| ||||| | ||| ||||||| || |||||||| |||| Sbjct 1607395 GCTCCGACATGAGGTTGTAGGTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGA 1607454 Query 112056 TTGCGACCCGCATGAACATGTACTGTGGG 112084 || || ||||||| ||||| ||| ||| Sbjct 1607455 CGGCCACACGCATGAGCATGTGCTGGGGG 1607483 >seq1 Length=5192464 Score = 95.1 bits (104), Expect = 2e-14 Identities = 235/348 (68%), Gaps = 9/348 (3%) Strand=Plus/Minus Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540 ||| || || || | ||| |||||||||||| | |||| || | |||||| ||||| Sbjct 4742879 GAGCAGGCGGTCGGCAACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 4742820 Query 122541 GAG-GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| | || ||||| || || || |||| | | ||| || | || ||||| || | Sbjct 4742819 GAGCGAGACG-GGGAGGGCCTCGGTGAGGAACTCCTGCTCGATGGCGACGGCCTCCTTGA 4742761 Query 122600 CGATGGCGTGG--ATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCA 122656 ||| | ||| || || |||| ||| || | || | ||||||| Sbjct 4742760 TGAT--CTTGGCAATGGTGTCGGG-GTGAGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGC 4742704 Query 122657 CGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGAC 122716 |||||| || |||||||||||| || || || || || || || |||||| |||| Sbjct 4742703 AGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGAC 4742644 Query 122717 CTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGA 122776 | |||||||| || |||||||| | ||| | || | | || || || |||||||||| Sbjct 4742643 CGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGA 4742584 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG 122824 | ||||| || || || |||| || || || ||||| || |||| Sbjct 4742583 TGCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAACGA-CGAG 4742537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 216/322 (67%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGATTTCAAAGAG 11688 || || || || || ||||||| ||||| || || ||| || || | |||| || Sbjct 2044660 GCGTCGATTTCGTCGATGAAGATGATACAGGGAGCGTTCTTCTTGGCCG-TCGCAAACAG 2044602 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCA 11748 ||||| || | || ||| ||||| ||||||||||| || || | | | ||| | Sbjct 2044601 GTCGCGGACACGCGAGGGACCGACACCGACAAACATCTCGACGAACTCGGAACCCGAG-A 2044543 Query 11749 CTGG-ATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 | | | ||| || || || | || || || |||| ||||||||||||||| || | Sbjct 2044542 CGGACAGGAACGGCACCTTGGCCTCTCCGGCAGTGGCCTTGGCGAGGAGGGTCTTACCGG 2044483 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATA 11865 |||| || ||||| ||| | ||| || ||||| |||||||| || |||| || Sbjct 2044482 TACCAGGAGGACCCGAGAGGATGGCACCACGGGGAATCTTGGCGCCGAGCTTC--TCGTA 2044425 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAAT 11925 | | |||| | |||||| || | |||| ||| || || || ||| || |||| || Sbjct 2044424 TTTTGCGGGCTCCTTGAGGAACTTGACAAACTCCATAATCTCCTCCTTGCCCTCGTCCAT 2044365 Query 11926 CCCCTCAACATCACTGAAGCGG 11947 || | || || | ||| ||| Sbjct 2044364 ACCGGCGACGTCGCGGAAACGG 2044343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031921496000