Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 197 2e-45 seq1 123 3e-23 seq2 105 8e-18 seq3 84.2 3e-11 >seq6 Length=2565775 Score = 197 bits (218), Expect = 2e-45 Identities = 677/1049 (65%), Gaps = 31/1049 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| |||||| ||||||| || || || ||||||| || Sbjct 1607483 CCCCCAGCACATGCTCATGCGTGTGGCCGTCGGTATCCACGGCGACAACATTGAGAAGGT 1607424 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | ||||| ||| || ||||| | | |||| ||||| | || |||||||| Sbjct 1607423 CCTCGAGACCTACAACCTCATGTCGGAGCGCTACTTCACCCACGCGTCTCCTACCCTCTT 1607364 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| | ||||| || |||| ||||| |||||||| |||||| ||||| || Sbjct 1607363 CAACTCGGGTACCCCCCACGCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAAGGACGA 1607304 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || |||| ||||| | || || | | || || || ||||| ||| || || Sbjct 1607303 CTCGATTGACGGCATCTACGACACCCTCAAGACCTGCGCCCAGATCTCCAAGACTGCCGG 1607244 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 104518 ||||| || | |||||||| | | | |||| | ||||| ||| || || Sbjct 1607243 TGGTATCGGTCTCCACATCCACAACATTCGTGCCA--AGGGCTCGTACATTGCCGGCACC 1607186 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || | || | || || | || ||||| |||| | ||||||| || || || Sbjct 1607185 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGCGCGTACGACGCCACTGCTCGTTAC 1607126 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||||| || | | || |||| |||||||| ||| Sbjct 1607125 GTCGACCAGGGTGGCAACAAGCGTC---CCGGTGCCTTTGCCATCTACCTTGAGCCCTGG 1607069 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| ||| | | || ||||| || || | ||||| || | ||||||| || Sbjct 1607068 CACGCCGATGTGTTCGACTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCGC 1607009 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| || ||||||| ||| |||||||| || || |||||||||||| | || ||| || Sbjct 1607008 GCCCGTGACCTCTTCTACGCCCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCAG 1606949 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 ||| | ||| | ||| | || || | | || || || || |||| | | Sbjct 1606948 GACGGCGAGTGGACCCTCATGTGCCCTGCCGAGTGCCCCGGCCTTGCCGACGTCCACTCG 1606889 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAG---GAAG---AAGGTCGGGCGACTGCG 104866 ||| |||| || | || ||| ||||||||| || | | ||||| ||| Sbjct 1606888 GAGAAGTTCGAGGAGCTGTACGAGAAGTACGAGCGTGAGGGCAAGGGTCGCAAGACCATC 1606829 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || |||| || | ||| ||||| || || |||| |||||||||||| Sbjct 1606828 AAGG-CCCAGAAGC-----TCTGGTTCGCTATCCTTGAGGCTCAGACCGAGACTGGTGGC 1606775 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||| ||||| ||||| |||| ||| || || || | | || Sbjct 1606774 CCGTTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACC 1606715 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||| ||||| ||||| || || ||| | || | | | | |||||| ||| Sbjct 1606714 ATCAAGTCCTCCAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCCGATGAGGTCGCT 1606655 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 || || |||||||| || |||||||||| | || || ||||| || | | Sbjct 1606654 GTCTGCAACCTCGCGTCTCTCGCTCTCCCTGCCTTCGTCGACTTCGAGACCAACTCGTAC 1606595 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || |||||| | | || || || ||||| ||||| || || || Sbjct 1606594 GACTTCAAGAAGCTCCACCAGATCACCAAGGTCGTTACCAAGAACCTCGACCAGGTCATC 1606535 Query 105167 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || || | |||||||| |||| ||||| || || || ||| | ||||| || Sbjct 1606534 ACCAGGAACTACTACCCCGTTCCTGAG---GCTCGCAACTCGAACATGCGCCACCGCCCC 1606478 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGA 105252 | ||||| ||||| |||||||| || || Sbjct 1606477 GTCGGTCTTGGTGTCCAGGGTCTTGCCGA 1606449 >seq1 Length=5192464 Score = 123 bits (136), Expect = 3e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || || |||||||| || | || || || || ||||| ||||||||||| || || Sbjct 4742541 TCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCG 4742600 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || | | || | |||||||||||||| || |||||||| |||||| |||||||||| Sbjct 4742601 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAAC 4742660 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| ||||||||||| |||||| || ||||| Sbjct 4742661 GAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGC 4742701 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/238 (70%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 9752 |||||| | || || || || || ||||||| ||| || || || ||| | || Sbjct 2044670 CTTTCCGATAGCGTCGATTTCGTCGATGAAGATGATACAGGGAGCGTTCTTCTTGGCCGT 2044611 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | |||| || || || |||||| || || ||||| ||||||||||| || || | | Sbjct 2044610 CG-CAAACAGGTCGCGGACACGCGAGGGACCGACACCGACAAACATCTCGACGAACTCGG 2044552 Query 9813 CGGCGGA-ACATTGGAT--GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9869 | || || ||| ||| || || || | || || ||| |||| |||||| | Sbjct 2044551 AACCCGAGAC---GGACAGGAACGGCACCTTGGCCTCTCCGGCAGTGGCCTTGGCGAGGA 2044495 Query 9870 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 | |||||||| ||||| || ||||| ||||| |||||| || |||||||||||||| Sbjct 2044494 GGGTCTTACCGGTACCAGGAGGACCCGAGAGGATGGCACCACGGGGAATCTTGGCGCC 2044437 >seq2 Length=3535900 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 94814 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGC 94873 |||| |||||||| || || || ||||||||||| || || ||| ||| || | |||| Sbjct 2109905 TCGCCTTTGCGTGCGTCGAAGGCATCTTCTTCTCGGGCTCTTTCGCCGCCATCTTCTGGC 2109964 Query 94874 TCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACG 94933 |||||||||| || ||||||||||| || ||||| |||||||| ||| || |||| Sbjct 2109965 TCAAGAAGCGTGGCCTCATGCCAGGGCTTACGTTCTCGAACGAGCTGATCAGCCGCGACG 2110024 Query 94934 AGGGACTCCACCAAGAGTTTGCG 94956 |||| | ||| || |||||| Sbjct 2110025 AGGGCATGCACACCGACTTTGCG 2110047 >seq3 Length=3082120 Score = 84.2 bits (92), Expect = 3e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||| | ||| || ||||| | |||| ||| || | ||| || | | ||||| Sbjct 361479 GCATCCAGCTCGTCGATGAAAATGATGGCCGGTGCCTTGTTGCGGGCAGCCTTGAAGAGC 361538 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9823 || || ||||||||||| || ||||| ||| ||| ||| ||||| | | | | || Sbjct 361539 TCACGCACACGCTTGGCACCAACACCGACATACAGCTCGTCAAAGCTGGAGCCAGAGGCA 361598 Query 9824 TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9883 | ||| |||||| | || || |||| || |||||||| || ||||| || ||| Sbjct 361599 AACAGGAAAGGGACACCGGCCTCGCCAGCAACAGCGCGGGCGAGCAGGGTCTTGCCGGTA 361658 Query 9884 CCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || || || | ||||||| |||| || || | |||| |||| Sbjct 361659 CCAGGAGGGCCAGTGAGGAGGACACCGCGGGGGAGCTTGCCGCC 361702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260727092400