Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 168 2e-36 seq1 129 2e-24 >seq2 Length=3535900 Score = 168 bits (186), Expect = 2e-36 Identities = 602/933 (65%), Gaps = 11/933 (1%) Strand=Plus/Minus Query 349217 GGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAAT 349276 ||||| || || || ||||| || || ||||| || || ||||| || || || || || Sbjct 3350452 GGTACCACCTACTCCTGTGTCGCCGTCTGGCAGAACGACCGTGTCGAGATCATCGCCAAC 3350393 Query 349277 GATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATT 349336 || || |||||| | || || || || || || || || ||||| | |||||| | || Sbjct 3350392 GACCAGGGTAACCGCACCACCCCCTCCTATGTCGCCTTCACCGACTCGGAGCGTCTCATC 3350333 Query 349337 GGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAG 349396 ||||| |||| || || || | || || || | || || || || || || ||| Sbjct 3350332 GGTGACGCTGCCAAGAACCAGGTCGCCATGAACCCCTACAACACCGTCTTCGACGCCAAG 3350273 Query 349397 CGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA--CAATCTGATCTAAAACATTTT 349453 || ||||| || | ||||| | ||| | || || || || | || || | Sbjct 3350272 CGTCTTATCGGCCGCAAGTTCGAC-GACGC--CGACGTCCAGTCCGACATGAAGCACTGG 3350216 Query 349454 CCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGT 349513 || || | || | | || | ||| || || | || |||| || || ||| Sbjct 3350215 CCCTTCAAGGTCATCTCCAAGGCCGGC---AAGCCCTTCATCCAGGTCGAGTACCGCGGT 3350159 Query 349514 GAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAA 349573 || | || || || | ||||| || || || || ||||| | | || |||||||| Sbjct 3350158 GAGGAGAAGCAGTTCTCGCCCGAGGAGATCTCGTCCATGGTCCTCATCAAGATGAAGGAG 3350099 Query 349574 ATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTAT 349633 | || || || || | || | || || | | || || | || || || ||||| Sbjct 3350098 ACCGCCGAGGCCTACCTTGGCGGCACCGTCTCCAAGGCCGTCGTCACCGTCCCCGCCTAC 3350039 Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693 || || || | |||||| || || || || || || | |||||| || | | || Sbjct 3350038 TTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCCGGTACCATTGCCGGCCTCGAGGTC 3349979 Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGT 349753 || | || || || || ||||| || || || ||||| ||||| || || || | || Sbjct 3349978 CTCCGTATCATCAACGAGCCCACCGCCGCCGCCATTGCCTATGGTCTCGACAAGAAGACC 3349919 Query 349754 GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTA 349813 || || || || |||| || || || | ||||||||||| || ||||| || || Sbjct 3349918 GAGGGCGAGAAGAACGTTCTCATCTTCGACCTTGGTGGTGGTACCTTCGATGTCTCGCTC 3349859 Query 349814 CTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873 || || | || ||||| || || || || || || ||||| ||||| || || |||||| Sbjct 3349858 CTCACCATCGAGGAGGGCATCTTCGAGGTCAAGGCCACTGCCGGTGACACCCACCTTGGT 3349799 Query 349874 GGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-C 349932 || || || || || || |||||||| || || || | || || ||||| |||| Sbjct 3349798 GGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTCCAGGAGTTCAAGCG-CAAGAA 3349740 Query 349933 TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACG 349992 || | || || || || | || | ||||| || | || || ||||| || Sbjct 3349739 CAAGAAGGACCTTTCTTCCAACGCTCGTGCCCTCCGTCGTCTCCGCACCGCCTGTGAGCG 3349680 Query 349993 TGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGA 350052 ||| ||||| || | || || || |||| ||||| || || || || || || || Sbjct 3349679 TGCCAAGCGCACCCTCTCGTCGGCTGCCCAGACCTCGATCGAGATCGACTCGCTCTTCGA 3349620 Query 350053 TGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCT 350112 || | || |||| | || || || ||||| || || || || | || ||| || Sbjct 3349619 CGGTATCGACTTCTACACCTCGATCACTCGTGCCCGTTTCGAGGAGCTCTGCCAGGACCT 3349560 Query 350113 TTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 || | | || ||||| || || || || || Sbjct 3349559 CTTCCGCTCCACCATGGAGCCCGTTGAGAAGGT 3349527 >seq1 Length=5192464 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || |||||||||||||| || || || || || || Sbjct 4724020 CATACCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 4724079 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || || || || || ||||| ||||| Sbjct 4724080 CGAAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGG 4724139 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || | || ||||| || || | || || | || Sbjct 4724140 AGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTC 4724199 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || ||||| |||||||| Sbjct 4724200 GACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 100 bits (110), Expect = 9e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || ||||| || || || Sbjct 4723564 CATACCACCACGCAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 4723623 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || || ||||| ||||| ||||| || || Sbjct 4723624 GGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGG 4723683 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || || || || |||||||| || ||| || || || || || | || | | Sbjct 4723684 GGGGATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGCTCGACT 4723742 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || |||| ||||| || || | || || || || |||||||| Sbjct 4723743 CGACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254205858030