Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6 295 7e-75 seq1 156 5e-33 seq2 111 2e-19 >seq6 Length=2565775 Score = 295 bits (326), Expect = 7e-75 Identities = 528/767 (69%), Gaps = 8/767 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||||||||| ||| || | |||| ||||| ||| Sbjct 1607469 TCATGCGTGTGGCCGTCGGTATCCACGGCGACAACATTGAGAAGGTCCTCGAGACCTACA 1607410 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | ||||| || ||||| | || ||||| |||||| | ||||| Sbjct 1607409 ACCTCATGTCGGAGCGCTACTTCACCCACGCGTCTCCTACCCTCTTCAACTCGGGTACCC 1607350 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| | ||||||||| |||||||| || || |||||||| |||||||| ||||||| Sbjct 1607349 CCCACGCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAAGGACGACTCGATTGACGGCA 1607290 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| || ||||| ||||||||| | |||||||||||| ||| Sbjct 1607289 TCTACGACACCCTCAAGACCTGCGCCCAGATCTCCAAGACTGCCGGTGGTATCGGTCTCC 1607230 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | ||| | ||||| || ||| | || || || |||||| | | | | Sbjct 1607229 ACATCCACAACATTCGTGCCAAGGGCTCGTACATTGCCGGCACCAACGGCTACTCGAACG 1607170 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||||| || |||||||||| | | || ||| || || |||||| |||||||||| Sbjct 1607169 GCATCGTCCCCATGCTCCGCGCGTACGACGCCACTGCTCGTTACGTCGACCAGGGTGGCA 1607110 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||||| || | || ||||||||||| ||||| ||||||||||| | | || | Sbjct 1607109 ACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCCGATGTGTTCGACT 1607050 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671 | ||||| ||| | ||| || || | || ||| | ||| ||||||||| || ||| Sbjct 1607049 TCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGACCTCTTCTAC- 1606991 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| || |||||||||||| | || ||| |||||| |||||| ||| Sbjct 1606990 GCCCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCAGGACGGCGAGTGGACCCTC 1606931 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 |||||||| ||||||||||||||| | ||| || ||| |||| | ||| || Sbjct 1606930 ATGTGCCCTGCCGAGTGCCCCGGCCTTGCCGACGTCCACTCGGAGAAGTTCGAGGAGCTG 1606871 Query 53792 TATCGGACGTACGCAGTTCAGGGC---CGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848 || || ||||| | ||||| | ||||| | ||||||| | || | Sbjct 1606870 TACGAGAAGTACGAGCGTGAGGGCAAGGGTCGCAAGACCA---TCAAGGCCCAGAAGCTC 1606814 Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908 ||| || ||||| || ||| ||||| || |||| |||| ||||||||| Sbjct 1606813 TGGTTCGCTATCCTTGAGGCTCAGACCGAGACTGGTGGCCCGTTCATGCTCTACAAGGAC 1606754 Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATC 53955 | | |||| ||| |||||| || || ||||| |||||| || Sbjct 1606753 GCTGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACCATCAAGTC 1606707 Score = 109 bits (120), Expect = 6e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 ||||||| || ||| ||| || ||||||||| | |||||| | | || ||| | | Sbjct 1605952 CTCAAGGCCATCTACAAGACTGTCTGGGAGATTTCGCAGAAGGCTGTCATCGACCTCGCT 1605893 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || || |||||||| | |||||||||||| ||||| || |||||| | | | || || Sbjct 1605892 GCCGACCGTGGTGCCTTCATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCCAACCCC 1605833 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || | | || | | ||||||||||| ||||| |||||| || |||||||| ||| Sbjct 1605832 TCCTTCTCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGTGGTCTCAAGACTGGT 1605773 Query 55907 ATGTACTATCTGCGGACCCG 55926 ||||| || || ||||| Sbjct 1605772 GCCTACTACCTCCGCACCCG 1605753 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||| ||| ||||||| || ||| |||||||| | | ||| ||||| || || Sbjct 1606553 GAACCTCGACCAGGTCATCACCAGGAACTACTACCCCGTTCCTGAGGCTCGCAACTCGAA 1606494 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 | | || ||||| ||| ||| | ||||| ||||| | ||||||| ||||||| || Sbjct 1606493 CATGCGCCACCGCCCCGTCGGTCTTGGTGTCCAGGGTCTTGCCGACACCTTCATGGCCCT 1606434 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGA 55290 | | | ||||||||||||| |||||| || Sbjct 1606433 CCGTCTCCCCTTCGACTCGGCCGGTGCTCGTGA 1606401 >seq1 Length=5192464 Score = 156 bits (172), Expect = 5e-33 Identities = 301/442 (68%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| || || || || |||||||||| ||| | ||| || || | || | | ||| Sbjct 3159757 CCGGTGCCAATACCGTCCGCACCGTTGATCAGGACCATTGGAACGGTGGGTAAGAAGAAC 3159816 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || || || | ||| ||||| || |||| || ||| || | | || | ||| || || Sbjct 3159817 TCAGGTTCGATCTGATGACCATCTTCCACCAAGTAGTTGAGGAGGGCGTCGTCCGCGGGG 3159876 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGC--GTGAAGATGTATCGGGAGCTGGCCG 152053 | ||| | ||||||||| | || | ||||| ||||| || | |||||||| Sbjct 3159877 TGGAAGACTGCTCGAGTCATGCGCG--AAGTGTTGGTGAAAATGTAACGAGGGCTGGCCG 3159934 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 |||| || |||||| || || || || ||||| || ||||| |||| ||||| || Sbjct 3159935 CATCTTTTCCACCTTGCATGCGGGTGCCGAACTGGCCGTTCGGCTCAAGGATGTTGACGT 3159994 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 ||||| |||||| ||| |||| || | | | | || ||| |||| ||| || | Sbjct 3159995 TGTTGCTGCCCACAAAACTCTGCGCAAGACTGATGATGGTGGAGTGCAAACTTTGCTCGC 3160054 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 ||||||| ||| | || ||||| || | || || | || ||| | ||||| || ||| Sbjct 3160055 CGTGGTGGTACTCGGTGTGCTCGGCAACATAACCAGACAGCTGTGAGACCTTGATCTCCT 3160114 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 | | || || ||||| |||||||| | |||||||||||| || || ||||| | Sbjct 3160115 TGGAAAGATTGCGCTTGAAGCAGGCGTACAGCACCTTGCGCTGACCAGGCTTGAAACCAT 3160174 Query 152294 CCACCACGTGAGGAATCGAACG 152315 | | || ||||| ||||| Sbjct 3160175 CAGCAACCGAGGGAATGGAACG 3160196 Score = 141 bits (156), Expect = 1e-28 Identities = 303/444 (68%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || || ||||| || ||||| || ||||| | ||| || ||| || | | ||||| Sbjct 3159757 CCGGTGCCAATACCGTCCGCACCGTTGATCAGGACCATTGGAACGGTGGGTAAGAAGAAC 3159816 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 ||||| || | ||| |||| || ||| | ||| ||||| | || | ||| || Sbjct 3159817 TCAGGTTCGATCTGATGACCATCTTCCACCAAGTAGTTGAGGAGGGCGTCGTCCGCGGGG 3159876 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGA--GTGAAAATGTAACGAGAGCTTGCAG 117329 | ||| | | || | || | || | | | |||||||||||||||| ||| || | Sbjct 3159877 TGGAAGAC-TGCTCGAGTCATGC-GCGAAGTGTTGGTGAAAATGTAACGAGGGCTGGCCG 3159934 Query 117330 CATCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 |||| || ||||| ||| | || || ||||| || || ||||||| | || ||| | | Sbjct 3159935 CATCTTTTCCACCTTGCATG-CGGGTGCCGAACTGGCCGTTCGGCTCAAGGATGTTGACG 3159993 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 |||||| ||||||||| | || || | ||| || || || | || ||| Sbjct 3159994 TTGTTGCTGCCCACAAAACTCTGCGCAAGACTGATGATGGTGGAGTGCAAACTTTGCTCG 3160053 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCT 117508 || ||||| ||| | || ||||| || || || || | |||||| | ||||| || || Sbjct 3160054 CCGTGGTGGTACTCGGTGTGCTCGGCAACATAACCAGACAGCTGTGAGACCTTGATCTCC 3160113 Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568 | || || ||||| |||||| || | |||||||||||||| ||||| | |||| Sbjct 3160114 TTGGAAAGATTGCGCTTGAAGCAGGCGTACAGCACCTTGCGCTGACCAGGCTTGAAACCA 3160173 Query 117569 TCCGCCACGTGAGGG-ATCGAACG 117591 || || || ||||| || ||||| Sbjct 3160174 TCAGCAAC-CGAGGGAATGGAACG 3160196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 130/187 (70%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995 ||||||| |||||||| || ||||||| || || || || || || || |||| ||||| Sbjct 3160928 TGGCATCGCGAACATTCAGCAGCTTTCCGCGCAGAGGGAAGACTCCAAAGGCGTCGCGGC 3160987 Query 152996 CTACAA------CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGA 153049 | | | || ||| | | || ||||||| || |||||||| || || |||| Sbjct 3160988 CATCTGGAGTCGCACTGAGAGCAGAAACGGCAAGGGTCTTGGCCGAGTCTCCTTCTGTGA 3161047 Query 153050 TAATAAGCGTACAGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 ||||| ||||| | || | | || | || |||||||||||||| || | ||| | Sbjct 3161048 GGATAAGAGTACACTTGTCCGCCTTGCGACTGCCCGCCCAGTTGGCGTCATCCAACTTTG 3161107 Query 153110 GGATTCC 153116 ||| || Sbjct 3161108 CGATACC 3161114 >seq2 Length=3535900 Score = 111 bits (122), Expect = 2e-19 Identities = 125/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 74729 CAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCA 74787 |||||| ||| ||| | |||| |||| || ||| ||| || || | ||| |||| Sbjct 2110068 CAGGTGCTGGTACAGCAGGCACG-CAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATCA 2110010 Query 74788 ATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCAC 74847 || ||||| |||| ||| || ||||| || ||||||||||| | ||| |||||||| Sbjct 2110009 GCTCGTTCGAGAACGTAAGCCCTGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGCGG 2109950 Query 74848 AGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGA 74892 ||| || || |||||||||||||||||| ||||||||||||| Sbjct 2109949 CGAAAGAGCCCGAGAAGAAGATGCCTTCGACGCACGCAAAGGCGA 2109905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 75024 TCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAG 75083 ||||||| || ||||||||||| ||||| | |||| | | | |||| | |||||| Sbjct 2109675 TCAATCAACAGACTGTACGTCTCCGCATGAACCTGCTCGATCATGGTCTGGAAAGCGTAG 2109616 Query 75084 AAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATG 75143 || | |||||| || |||||||| |||||| ||||||| | | ||| ||||| Sbjct 2109615 AAGGCCCGCGCTTCGGCAATCTGCACATCCATTGAAAACTGCGACACGAGGTTCTCGCCA 2109556 Query 75144 ACGATGCCGTCCGAGGCGGCGAAAAAAGCCAG 75175 |||||||| ||||||| || || ||||| || Sbjct 2109555 ACGATGCCATCCGAGGAAGCAAAGAAAGCGAG 2109524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215931598000