Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq5 100 2e-16 >seq1 Length=5192464 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| || || ||||| Sbjct 4723566 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTCGAGTCGTCC 4723507 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 4723506 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 4723447 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || |||| || | || | ||||| |||||| Sbjct 4723446 CAGCGCCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACGCTGTCCGACTACAAC 4723387 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | || |||| | ||| | || || ||| Sbjct 4723386 ATCCAGAAGGAGTCGACGCTCCACCTGGTCCTCCGTCTTCGTGGAGGC 4723339 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||||| || || || | || Sbjct 4724022 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACTCTCGAGGTTGAGTCTTCG 4723963 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| || ||||| || ||||| || Sbjct 4723962 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 4723903 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | ||| | ||||| |||||| Sbjct 4723902 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 4723843 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| | || ||||| || Sbjct 4723842 ATCCAGAAGGAGTCGACGCTCCACCTTGTTCTTCGTCTCCGCGGTGGTAT 4723793 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| ||||||| || || || || || | Sbjct 4723794 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAGGTCGAGTCGAGC 4723735 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || || || || ||||| || Sbjct 4723734 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAG 4723675 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || ||| | || ||||||| |||||| Sbjct 4723674 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCCGACTACAAC 4723615 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || | || | || |||| ||||| || Sbjct 4723614 ATTCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGCCTGCGTGGTGGTAT 4723565 >seq5 Length=2714734 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || || |||||| | || || || || || || | || ||| | || || Sbjct 1972460 GTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGAC 1972401 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || || ||||| || ||||| || ||||| || ||||| | || Sbjct 1972400 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATC 1972341 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| || | || ||| | ||| |||| || |||||||| || |||||| Sbjct 1972340 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAG 1972281 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| | || |||| | ||| |||| ||||| || Sbjct 1972280 TCGACCCTCCACCTGGTCCTCCGTCTGCGTGGTGGTAT 1972243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918345635200