Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 >seq4 Length=3026064 Score = 140 bits (154), Expect = 3e-28 Identities = 240/343 (70%), Gaps = 8/343 (2%) Strand=Plus/Plus Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843 |||||||||||||| || |||||||| | ||| ||||| ||| | | || || Sbjct 1700464 CGGGTTCCACGCGCTCAGCACGATCCGCCGGTCGGTCGGGTTGTTCTTGATCTTATCAAT 1700523 Query 6844 CACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACT 6902 || | | || |||||||| | |||| |||| ||||| | |||| | ||| Sbjct 1700524 GACCT-CGGCGAGCTGGTCGACGCCCTTGCCCGCGTAGTCGTCCTCGCAGGTGCCGTACG 1700582 Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962 |||| |||||||| | ||||||||| || || ||||| || | ||||||||| | | | Sbjct 1700583 CCGCGCCAAAGTGGCGCCACTGGAAGCCATACACCGGCCCGAGGTCGCCCTCG--CGGCG 1700640 Query 6963 ATGGGAA---CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019 || || || ||| |||||| || || || ||||||| || ||||||| | || Sbjct 1700641 GTGCGAGAGGCCAACGCG-GTCCAGGAACTCGCGCGACCCGTTCCCGGCCCAGATGTGCA 1700699 Query 7020 CCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079 | ||| | | |||| | ||| || |||| || |||||||||||||||||||| Sbjct 1700700 CGCCCTTCGCGGCGAGCACGTTGCCGTCCGTGCAGCCGGCCACGAACCACAGCAGCTCCT 1700759 Query 7080 CGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||| |||||| | | |||| || |||||||||||||| || Sbjct 1700760 CGATCACGCCGCGCGTGAACACGCGCTTCGTCGTCAGCAGGGG 1700802 Score = 140 bits (154), Expect = 3e-28 Identities = 240/343 (70%), Gaps = 8/343 (2%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || |||||||||||||| || |||| | | |||||| |||||||||||||||||||| Sbjct 1700802 CCCCTGCTGACGACGAAGCGCGTGTTCACGCGCGGCGTGATCGAGGAGCTGCTGTGGTTC 1700743 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| || |||| || ||| | |||| | | ||| ||| | ||||||| || Sbjct 1700742 GTGGCCGGCTGCACGGACGGCAACGTGCTCGCCGCGAAGGGCGTGCACATCTGGGCCGGG 1700683 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGG---TTCCCATCTCGGGAGGAGGGCGAC 34399 ||||||| || || || |||||| ||| || || || | | | ||||||||| Sbjct 1700682 AACGGGTCGCGCGAGTTCCTGGAC-CGCGTTGGCCTCTCGCACCGCCG--CGAGGGCGAC 1700626 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459 | || ||||| || || ||||||||| | |||||||| |||| ||| | |||| Sbjct 1700625 CTCGGGCCGGTGTATGGCTTCCAGTGGCGCCACTTTGGCGCGGCGTACGGCACCTGCGAG 1700566 Query 34460 GCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAAGCG 34518 | ||||| |||| |||| | |||||||| || | | || || || | | ||| Sbjct 1700565 GACGACTACGCGGGCAAGGGCGTCGACCAGCTCGCCG-AGGTCATTGATAAGATCAAGAA 1700507 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCG 34561 ||||| ||| | |||||||| || |||||||||||||| Sbjct 1700506 CAACCCGACCGACCGGCGGATCGTGCTGAGCGCGTGGAACCCG 1700464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262343967200