Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 194 4e-44 seq5 172 1e-37 >seq1 Length=5192464 Score = 194 bits (214), Expect = 4e-44 Identities = 170/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||||||||| ||||| || |||||||| || |||| |||||| | || || Sbjct 4724039 AGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCC 4724098 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || ||||| || ||||||||||| | || ||||||||| Sbjct 4724099 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 4724158 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| ||| || ||||| |||||||| ||| Sbjct 4724159 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 4724218 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| | |||||| Sbjct 4724219 TTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 4723811 AGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 4723870 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || |||| || ||||||||| Sbjct 4723871 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 4723930 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct 4723931 TGGATCTTGCTCTTGACGTTGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTC 4723990 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 4723991 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 154 bits (170), Expect = 3e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||| ||||| || || ||||| || |||||||| || || | || Sbjct 4723342 TCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAG 4723401 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| |||||||||||||| || ||||||||||| || ||||| || || | Sbjct 4723402 CGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGGAT 4723461 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||| ||||| || ||||| || |||||||| || || ||||| Sbjct 4723462 GCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACCTC 4723521 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || | ||||| || || | |||||| Sbjct 4723522 AAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 147 bits (162), Expect = 5e-30 Identities = 138/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||| || || || ||| Sbjct 3468017 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 3468076 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || || | || ||||||||||||||||| || ||||| ||||||||||| ||| Sbjct 3468077 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAG 3468136 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| ||||| |||||||| ||||| || || | |||||| Sbjct 3468137 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||| ||||| || || ||||| || || | ||| || | || || Sbjct 4723583 AGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 4723642 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 4723643 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 4723702 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| |||||||| ||||||||||| ||| || |||||||| || || Sbjct 4723703 TGAATCTTGCTCTTCACGTTGTCGATGGTGTC---GCTCGACTCGACCTCGAGGGTAATA 4723759 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| | ||||| || || | |||||| Sbjct 4723760 GTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| ||||| | || || || ||||||||||| |||||||| || || || ||| Sbjct 4724353 TAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 4724412 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || ||||| | || ||||||||||||||||| || ||||| || |||||||| ||| Sbjct 4724413 TCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAG 4724472 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || |||||||| || || ||||| || ||||| Sbjct 4724473 GACTCGACCTCGAGGGTAATGGTCTTGCCGGTGAG 4724507 >seq5 Length=2714734 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || |||| |||||| | || || Sbjct 1972261 AGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1972320 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 1972321 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1972380 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| ||| || |||||||| ||||| ||| Sbjct 1972381 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 1972440 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || |||||||| ||||| || Sbjct 1972441 TTGCCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151851483650