Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4 109 4e-19 >seq4 Length=3026064 Score = 109 bits (120), Expect = 4e-19 Identities = 229/339 (68%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 |||||||| |||| || | ||| |||| ||| ||||||||| |||| || | | Sbjct 1700465 GGGTTCCACGCGCTCAGCACGATCCGCCGGTCGGTCGGGTTGTTCTTGATCTTATCAATG 1700524 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTC 27503 | | ||||| || || ||| | |||| |||||| || | || || | |||| | Sbjct 1700525 ACCTCGGCGAGCTGGTCGACGCCCTTGCCCGCGTAGTCGTCCTCGCAGGTGCC-GTACGC 1700583 Query 27504 TGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 27563 || || || || | ||| ||||| || |||||||| || ||||| ||||| | ||| Sbjct 1700584 CGCGCCAAAGTGGCGCCACTGGAAGCCATACACCGGCCCGAGGTCGCCCTCGCGGCGGTG 1700643 Query 27564 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 27623 | || ||| ||||| || || | || ||||| || ||||||| | || || Sbjct 1700644 CGAGAGGCCAACGCGGTCCAGGAACTCGCGCGACCCGTTCCCGGCCCAGATGTGCACGCC 1700703 Query 27624 CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 27683 |||| ||| |||| | ||| || ||| | || |||||||||||||||||||| | Sbjct 1700704 CTTCGCGGCGAGCACGTTGCCGTCCGTGCAGCCGGCCACGAACCACAGCAGCTCCTCGAT 1700763 Query 27684 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||| | | || || | ||| ||||| || ||||| Sbjct 1700764 CACGCCGCGCGTGAACACGCGCTTCGTCGTCAGCAGGGG 1700802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507154966310