Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=5192464 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/204 (70%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||||||||| || ||||| || |||||||| || || | || Sbjct 4742662 TCGTTGGAGAAGGTGAGACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCA 4742603 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || || || ||||| ||||| || ||||| || || || | || | ||| || | Sbjct 4742602 AACGAGCCCGAGAAGAAGATGCCCTCGACGGCAGCGAAAGCAATCAGACGCTCAGCGAAC 4742543 Query 48302 -AC--TGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 || |||| ||| ||||| | | ||||| || ||||||||||| | || || Sbjct 4742542 GACGAGCGCTTGTCCGTG-ATCCAGTGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGG 4742484 Query 48359 CATTGTTTCTATAGCATTAAAGAG 48382 || || || || || | ||||| Sbjct 4742483 GATGGTGTCAATGGCCTGGAAGAG 4742460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668713166400