Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 seq5 156 9e-33 >seq1 Length=5192464 Score = 181 bits (200), Expect = 2e-40 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | ||| || || |||||||||||||| | Sbjct 4723795 ACCACCGCGGAGACGAAGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 4723854 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 4723855 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 4723914 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || ||| | ||||| |||||||||| || | Sbjct 4723915 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATCGTGTCCGAAGACTCAA 4723973 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 4723974 CCTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| || || || | || || || || ||||||||||| | Sbjct 4723567 ACCACCACGCAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 4723626 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 4723627 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 4723686 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| || ||| ||||| || ||| | ||||| ||||| | |||| Sbjct 4723687 GATACCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCGCTCGACTCGA 4723745 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || |||||||||||||| ||||| ||||| |||||||| Sbjct 4723746 CCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 4723794 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||| || || |||||||||||||| | Sbjct 4723340 CCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 4723399 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||||||||| || || || ||||||||||| | || || ||||| || Sbjct 4723400 AGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGG 4723459 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | || || ||||| || | ||||| Sbjct 4723460 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACC 4723519 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 4723520 TCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | || || || |||||||||||||| | Sbjct 4724023 ACCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGA 4724082 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || ||||| || |||| || || |||||| || Sbjct 4724083 AAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGG 4724142 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| || | ||||| Sbjct 4724143 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 4724202 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| || || |||||||| Sbjct 4724203 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 145 bits (160), Expect = 2e-29 Identities = 139/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| |||||||| ||||| || || || ||||| ||||| | ||| || | Sbjct 3468015 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 3468074 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| |||||||| | || ||| | ||||| ||||||| Sbjct 3468075 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCG 3468134 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 3468135 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 102 bits (112), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | || |||||||| ||||| || || || || || ||||| | ||| || | Sbjct 4724351 TGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCT 4724410 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| |||||||| | || ||| | || || ||||||| Sbjct 4724411 GGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCG 4724470 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||||| ||||| || || ||||| || || Sbjct 4724471 AGGACTCGACCTCGAGGGTAATGGTCTTGCCGGT 4724504 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || | |||||| | || || || || || || || || || | Sbjct 4742817 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCCTG 4742876 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || |||| || | || ||||| | |||||||||| || |||||| Sbjct 4742877 CTCGTCGCCCTTGGCAACGACAAGCTCTACAACTCGACCAACCCCTTCGACTTCATGGAG 4742936 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | || || |||||||| || | ||||||||||| ||||||| Sbjct 4742937 ATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGTC 4742981 Score = 86.0 bits (94), Expect = 1e-11 Identities = 235/353 (67%), Gaps = 9/353 (3%) Strand=Plus/Plus Query 273777 TTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAAC 273836 || ||||||||||| | | || || || || |||||||||| | | || ||| Sbjct 3159907 TTGGTGAAAATGTAACGAGGGCTGGCCGCATCTTTTCCACCTTGCATGCGGGTGCCGAAC 3159966 Query 273837 TGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTC 273896 || || | ||| || ||| | ||||||||| || || || ||| || | | | Sbjct 3159967 TGGCCGTTCGGCTCAAGGATGTTGACGTTGTTGCTGCCCACAAAACTCTGCGCAAGACTG 3160026 Query 273897 ACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAA 273956 | ||| || || | | |||||||||||| || || |||| ||||| | |||| Sbjct 3160027 ATGATGGTGGAGTGCAAACTTTGCTCGCCGTGGTGGTACTCGGTGTGCTCGGCAACATAA 3160086 Query 273957 CCACTGAACTGAGCAACCTTCACATCGCTCGTCAAG-TTTCGCTTGAATGCGGAATACAA 274015 ||| | ||| | ||||| | || || | ||| || |||||||| || |||| Sbjct 3160087 CCAGACAGCTGTGAGACCTTGATCTC-CTTGGAAAGATTGCGCTTGAAGCAGGCGTACAG 3160145 Query 274016 CACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATACTGCGTTCCAAATC 274075 |||||| ||||| |||||||| |||||| | ||||| ||||| || | || Sbjct 3160146 CACCTTGCGCTGACCAGGCTTGAAACCATCAGCAACCGAGGGAATGGAACG---GATATT 3160202 Query 274076 ATAC-CGA--GAGAACAAAATCAGTTCCTTGTCAATGAAGTCAGGGA-CGGGA 274124 | | | | |||||||| || || ||||||| | |||||||| || ||||| Sbjct 3160203 GTCCGCCATGGAGAACAAGATGAGCTCCTTGTTGACGAAGTCAGAGATCGGGA 3160255 >seq5 Length=2714734 Score = 156 bits (172), Expect = 9e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || ||||| || | || || || |||||||||||||| | Sbjct 1972245 ACCACCACGCAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1972304 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 1972305 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 1972364 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 1972365 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGAC 1972424 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| ||||| ||||| | ||||| || Sbjct 1972425 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739065886540