Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq5 114 9e-21 >seq1 Length=5192464 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 4723814 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 4723873 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | || ||||| ||| Sbjct 4723874 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 4723933 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | || || ||||| | || |||||||| Sbjct 4723934 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAAGACTCAACCTCGAGAGTGATCGTCTTG 4723993 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||| ||||| Sbjct 4723994 CCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || |||||| ||||||||||| || | || || |||| ||| Sbjct 4724042 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCC 4724101 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || |||| |||||||| || | ||| | || ||||| ||| Sbjct 4724102 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 4724161 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||||| ||| || ||||| | || || |||| Sbjct 4724162 ATCTTCGACTTGACATTGT--CGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCT 4724219 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| || ||||| ||||| Sbjct 4724220 TGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| ||||| |||||| ||||||||||| |||| || || | || ||| Sbjct 4723358 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCATCCTCC 4723417 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||| || | || | || ||||| ||| Sbjct 4723418 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 4723477 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||||| || || ||||| | || || ||||| Sbjct 4723478 ATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACCTCAAGTGTGATGGTCTTG 4723537 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| |||||||| ||||| Sbjct 4723538 CCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 |||| || |||||||| ||||| ||||| | ||||||||| || | || | || |||| Sbjct 3468036 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCT 3468095 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300 | ||| ||||| ||| | | | |||||||| | ||| || ||||| | || | Sbjct 3468096 TGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGA 3468155 Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| |||||||||||||| |||||||| ||||| Sbjct 3468156 TGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 >seq5 Length=2714734 Score = 114 bits (126), Expect = 9e-21 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| ||||||||||| || | || ||| |||| || Sbjct 1972264 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1972323 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||||| || | || | || ||||| ||| Sbjct 1972324 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1972383 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | ||| || ||||| | || || |||| Sbjct 1972384 ATCTTGGACTTGACATTGT--CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCT 1972441 Query 44307 TTCCCGTGAGGGTCTTCAC 44325 | |||||||||||||| || Sbjct 1972442 TGCCCGTGAGGGTCTTGAC 1972460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990356126170