Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 165 8e-36 seq5 134 1e-26 seq3 89.7 5e-13 >seq1 Length=5192464 Score = 165 bits (182), Expect = 8e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || ||||| ||||||||| ||||| ||||||||| Sbjct 4723796 CCACCGCGGAGACGAAGAACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 4723855 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || || ||||| ||||| | |||| Sbjct 4723856 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 4723915 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 4723916 ATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCCGAAGACTCAAC 4723974 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| || ||||| || ||||| ||||| |||||||| Sbjct 4723975 CTCGAGAGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4724022 Score = 152 bits (168), Expect = 5e-32 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| |||||||| || ||||| |||| || ||||||||||||||||| Sbjct 4723603 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4723662 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| ||||| | ||| | | |||||||||| || || |||| ||| Sbjct 4723663 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTC-ACGT 4723721 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||||||||||| ||||| | || || || |||||||||| ||||| | Sbjct 4723722 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGA 4723781 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 4723782 CGAAGATCTGCAT 4723794 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || ||||| ||||||||| ||||| |||||||| Sbjct 4723339 GCCTCCACGAAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 4723398 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || |||||||||||||| || || |||||||| ||||| | ||| Sbjct 4723399 CAGCGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGG 4723458 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | | ||| | | | |||||| |||||| | Sbjct 4723459 GATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGA 4723517 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || |||| ||||| ||||| |||||||| Sbjct 4723518 CCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 4723566 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| || Sbjct 4724024 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 4724083 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||||||||| ||||||||||| ||||| | || Sbjct 4724084 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGG 4724143 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||| ||||| | Sbjct 4724144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCGGAGGACTCGA 4724201 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| || || |||||||| Sbjct 4724202 CCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 4724250 Score = 114 bits (126), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||||||||| || || ||||| ||| Sbjct 3468017 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 3468076 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||| | || |||||||||| ||| || ||| ||| | | | ||||| Sbjct 3468077 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCCGA 3468135 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| | || || || || ||||| || ||||| ||||| |||||||| Sbjct 3468136 GGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3468192 Score = 86.0 bits (94), Expect = 6e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| ||||||||||| |||| |||||||||||||| ||||| || || ||||| ||| Sbjct 4724353 TAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 4724412 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 || | || | || |||||||||| ||| || Sbjct 4724413 TCGGGAGGGATGCCCTCCTTGTCCTGGATCTT 4724444 >seq5 Length=2714734 Score = 134 bits (148), Expect = 1e-26 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| || Sbjct 1972246 CCACCACGCAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1972305 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||| ||||| | ||| Sbjct 1972306 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 1972365 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 1972366 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAGGACTCGA 1972423 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 |||| | || || || || ||||| || ||||| || Sbjct 1972424 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1972460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 49791 CGAGCCGTCCGAGCACACGTTGCCCAGATCGCCGAGGTGACGCCGCGGGCTCGCGGGACC 49850 ||||||||| | |||||||| || || |||| ||| || || | | ||| || Sbjct 66225 CGAGCCGTCAGTCTTGACGTTGCCGAGGTCACCGACGTGGCGGTCCGAGGCGGTGGGGCC 66284 Query 49851 GCCGTGCGGCTGCCCGAACGGGTTCAGGTGCTCGCCTGCTGACGTGCACCCGTTCGAGGT 49910 |||||| || ||| ||||| | ||| |||| || |||||||| ||||||||| | Sbjct 66285 GCCGTGGTTCTTGCCGTGGGGGTTGAAGTGGCCGCCGGCGGACGTGCAGCCGTTCGAGTT 66344 Query 49911 GTCGCCGAATTCGTGGATGTG 49931 ||| ||||| ||||||||||| Sbjct 66345 GTCTCCGAACTCGTGGATGTG 66365 >seq3 Length=3082120 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 85806 GCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTCATCGAC 85865 || ||||| || |||||||| ||||||| |||||||| || ||||| ||||| ||| Sbjct 2267175 GCTCCTCGGTCTGGCCTCGCTGCCAAGCACTCGATCGACGTAGGTGCCGGTGTCATTGAC 2267234 Query 85866 GCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||||||||| ||| ||||| || | |||||||||| ||| || Sbjct 2267235 GCCGACTACCGAGGACCCGTCAAGGTCATCCTCTTCAACCTCGGTGA 2267281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303942212000