Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq60 95.1 1e-14 >seq60 Length=747880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||||||| | || | || || ||| ||| || || ||||||||||| | Sbjct 85651 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 85710 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| | ||||| |||||||||||| || | || | ||||||||||| || Sbjct 85711 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 85770 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||||||| || || ||||| | | || ||||| || | ||||||| Sbjct 85771 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG--ATGGTGTCAGAAGACTCCA 85828 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCT 48722 ||| | || ||||| ||||| ||||| || || || || |||| Sbjct 85829 CCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 85873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249834356266