Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq144 102 1e-16 >seq144 Length=33835 Score = 102 bits (112), Expect = 1e-16 Identities = 154/216 (71%), Gaps = 10/216 (5%) Strand=Plus/Minus Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717 |||||| | | ||| ||| ||||||||||| || || || || || |||||||| Sbjct 14240 AAACATAC--AGTCGGTGTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTC 14183 Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777 | ||| ||||| || || ||||| || ||||| || || || || || |||||||||||| Sbjct 14182 AATCCAGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAG 14123 Query 32778 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG- 32836 || || || || || || || ||||| | |||| ||| | || | || ||| || Sbjct 14122 AAGATACCCTCAACGGCAGCGAAGGCGACCAGTCGCTCGGC--AAAGGTCGAGGTCTTGG 14065 Query 32837 ----TATCCACTTTTGAGCCCAATCGGCCTTCtttt 32868 ||||||||| ||||||| || |||| |||| Sbjct 14064 ACGAAATCCACTTTAGAGCCCAGTC-ACCTTTTTTT 14030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629893173600