Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq144 98.7 1e-15 >seq144 Length=33835 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 ||||||| || | ||| ||||| | || ||||||||||| || || || || || | Sbjct 14232 AGTCGGTGTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTCAATCCAGGCA 14173 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 |||||||| ||||||||||| || || || || || |||||||| || ||||| | Sbjct 14172 TGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAGATACCCT 14113 Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATT 93278 | ||||| || || || || | || |||||||| | | || || ||||| | Sbjct 14112 CAACGGCAGCGAAGGCGACCAGTCGCTCGGCAAAGGTCGAGGTCTTGGACGAAATCCACT 14053 Query 93279 TTAAAGCCCAATCGGCTTTTTT 93300 ||| |||||| || ||||||| Sbjct 14052 TTAGAGCCCAGTCACCTTTTTT 14031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858948437840