Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq60 176 8e-39 seq83 89.7 9e-13 seq248 84.2 4e-11 >seq60 Length=747880 Score = 176 bits (194), Expect = 8e-39 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||||||||||| |||||||| ||||| || || || | ||||| || | ||| Sbjct 85674 GTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTG 85733 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| |||||||| || |||| || || || || ||||| ||||||||||| || ||||| Sbjct 85734 CTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTT 85793 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||||||| ||||||||||| | || || || || | ||||||||| || ||||| Sbjct 85794 GGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGT 85853 Query 68438 GAGGGTCTTGACGAATATCT 68457 ||||||||| ||||| |||| Sbjct 85854 GAGGGTCTTTACGAAGATCT 85873 >seq83 Length=2340728 Score = 89.7 bits (98), Expect = 9e-13 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCG--GATGAAAGCGCGCC 224505 |||||| ||| || | || || || |||| || |||||| ||| ||| ||| | Sbjct 1302690 TGTGAGTAATGACGAGCACTCCTCCCTCGAAGTCCTTAAGGGCCTCGAT--AAGAGCGGC 1302747 Query 224506 AAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTG 224565 || ||||| ||||| | | |||||||||||||||||| ||||| |||||||| | | Sbjct 1302748 GAGGGACTCTCGGTCCAAGTAGTTCGTCGGCTCATCCAACATGATGACGTGGGGTCGTCG 1302807 Query 224566 CCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCG 224625 ||| ||| || |||| || | ||| ||||| || || || ||||| || || || Sbjct 1302808 CCAGGTGGCGGCTCCAAGAACGACCTTGACCTTTTGTCCTCCGGAGAGACCTCGCATGGT 1302867 Query 224626 CGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655 ||| | ||||| |||| || ||||| Sbjct 1302868 GTTGTGCGAGGTGAACTCGGCCTCGAGACC 1302897 >seq248 Length=2255592 Score = 84.2 bits (92), Expect = 4e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||| ||| ||||||||| ||||||||||| | || || || || | ||||||||| | Sbjct 645441 GAACCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCT 645382 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||||||||||||| |||||||| Sbjct 645381 TCCCTGTAAGGGTCTTGACGAAGATCTGCAT 645351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619335605520