Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq144 104 4e-17 >seq144 Length=33835 Score = 104 bits (114), Expect = 4e-17 Identities = 157/217 (72%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACG-CAA 42690 ||||||||| || || | |||||||| || || ||||| | ||| ||| | | Sbjct 14019 CCCTGCATCCGAAAAAAAGGTGACTGGGCTCTAAAGTGGATTTCG--TCCAAGACCTCGA 14076 Query 42691 CGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCT 42750 | || | |||| | ||||| ||||| | ||||| ||||| |||||||| || || | | Sbjct 14077 CCTTTGCCGAGCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGGATCGT 14136 Query 42751 TCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAAC 42809 ||||||| ||||||||||||||| || ||| || ||||| ||| | || || ||||| Sbjct 14137 TCGCCTCGATCTTCTGGCTCAAGAAGCGAGGACTC-ATGCCTGGATTGACGTTTTCGAAT 14195 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 || | ||| ||||||||||| || || | |||| Sbjct 14196 GAGTTGATCTCGAGGGACGAGGGTCTTCACACCGACT 14232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336060072160