Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq60 95.1 1e-14 seq83 91.5 1e-13 >seq60 Length=747880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | || || ||| || ||||| || || Sbjct 85681 GTGGACTCTTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCG 85740 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||||||| || || || || ||||||||| ||| || |||| Sbjct 85741 GCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 85800 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||| || || | ||| | || || || || || || Sbjct 85801 ACGTTG-TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTGAGGGT 85859 Query 127096 TTTTACAAAAATCT 127109 ||||| || |||| Sbjct 85860 CTTTACGAAGATCT 85873 >seq83 Length=2340728 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 126872 ATTTACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGA 126931 || || | |||||| || || || | ||| | || | ||| | |||||||| || || Sbjct 220672 ATCTAGTTTACTGC-CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGG 220730 Query 126932 ATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGC 126991 || ||||| || || || || || || ||||| ||||| ||| ||||||||||| Sbjct 220731 ATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGC 220790 Query 126992 TGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGT 127042 |||||||| ||||| || |||||||| ||| ||| || ||||| ||||| Sbjct 220791 TGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 220842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499218959840