Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq144 96.9 3e-15 seq60 96.9 3e-15 >seq144 Length=33835 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 ||||||||||| || || | || || || ||||| || |||||||| || || || Sbjct 14218 CCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTCAATCCAGGCATGAGTCCTCGCTTC 14159 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || || | |||||| || |||||||||| ||||| ||||| ||||| Sbjct 14158 TTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAGATACCCTCAACGGCAGCGAAG 14099 Query 133036 GCCACCAGGCGCTCGCCGAACGT 133058 || ||||| |||||| | || || Sbjct 14098 GCGACCAGTCGCTCGGCAAAGGT 14076 >seq60 Length=747880 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 || |||||||| || |||||||| || ||||||||| | || || ||| | | |||| | Sbjct 85871 ATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACC 85812 Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | |||| | || | || |||| ||||| || ||||||||| | || || ||||| Sbjct 85811 ATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGCG 85753 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || || | ||| || || ||||| || || | || ||||| || ||||||||||| Sbjct 85752 ACTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGGATTACAACATCCA 85693 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || | || || || | || || | ||| |||| || Sbjct 85692 GAAAGAGTCCACCCTCCACCTCGTCCTTAGGTTGCGAGGAGG 85651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171136925440