Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq144 104 3e-17 seq65 89.7 6e-13 seq73 82.4 9e-11 >seq144 Length=33835 Score = 104 bits (114), Expect = 3e-17 Identities = 137/185 (74%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || || |||| ||||| | |||||| || | |||||||||||||||| Sbjct 14224 TGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTCAATCCAGGCATGAGTCCT 14165 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||| | || ||||||||||||||| ||||| || Sbjct 14164 CGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAGATACCCTCAACGGCA 14105 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTT-GTCGAA--CCACTTGAGAGC 119683 ||||| |||| || ||||| || ||||||||| | ||| | |||| |||||| ||||| Sbjct 14104 GCGAAGGCGACCAGTCGCTCGGC-AAAGGTCGAGGTCTTGGACGAAATCCACTTTAGAGC 14046 Query 119684 CCAGT 119688 ||||| Sbjct 14045 CCAGT 14041 >seq65 Length=690 Score = 89.7 bits (98), Expect = 6e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct 114 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCC 170 >seq73 Length=2505705 Score = 82.4 bits (90), Expect = 9e-11 Identities = 182/270 (67%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 109916 CATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGT 109975 || |||||||||| ||||||| | |||| || |||||||||||| | || || Sbjct 805059 CACCCCACATATCAAATTGAAGTTCTCCCTTAGAGACAGGAGAACCCTCGTAAGAGGTGT 805000 Query 109976 ACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCT 110035 | | || || | | |||| |||| | |||| || || || || ||||| || |||| Sbjct 804999 AGGCACCATCGATGGCAGCCATCTCGCAAGAAGATTCAAGAGCGGCGTGATAAATGGTCT 804940 Query 110036 CAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAA 110095 |||| || || || | || | |||| | | ||||| || | | | | | Sbjct 804939 CAAAGATCTGGATGTTGAGAAGCTTGGCCTCTGGAGACTCGAAAGGCATTCGAAGGATCA 804880 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 | ||| |||| || ||||| |||||||||||||| | || || || |||||| ||| Sbjct 804879 TGAACGCATCAGCGAGACCTTGAACACCGAGACCTACAGGTCGGTGTCGCATGTTTGAGT 804820 Query 110156 GTCGAGCAGTTTCT--ACGGGG--TAAAAG 110181 |||||| || || |||||| |||||| Sbjct 804819 TTCGAGC--TTCCTTCACGGGGTCTAAAAG 804792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974041654800