Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq83 96.9 6e-15 >seq83 Length=2340728 Score = 96.9 bits (106), Expect = 6e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || |||| | |||||| || ||||| | |||| ||| || || || ||||| || Sbjct 220686 CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 220745 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | |||| || || | || |||||||| || || |||| ||| ||||||||||| Sbjct 220746 AGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGG 220805 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || || || ||||| || || |||| || | || ||||||||||| |||||||| Sbjct 220806 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACC 220865 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAG 193339 || ||||| || || || || || || Sbjct 220866 TCGAGAGTGATGGTCTTTCCCGTAAG 220891 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || |||||||| || || |||| ||| ||||||||||| || || || ||||| || || Sbjct 221134 TGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATC 221193 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || ||||||||||| |||||||| || ||||| || || || || Sbjct 221194 TTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCC 221253 Query 193335 GTTAG 193339 || || Sbjct 221254 GTAAG 221258 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || |||||||| || || |||| ||| ||||||||||| || || || ||||| || || Sbjct 221498 TGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATC 221557 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || ||||||||||| |||||||| || ||||| || || || || Sbjct 221558 TTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCC 221617 Query 193335 GTTAG 193339 || || Sbjct 221618 GTAAG 221622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899651408649120