Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq82 122 1e-21 seq60 114 2e-19 seq58 107 2e-17 seq73 95.1 1e-13 seq144 91.5 2e-12 seq83 87.8 2e-11 >seq82 Length=1750706 Score = 122 bits (134), Expect = 1e-21 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || ||||||||||||||||| || | | Sbjct 510876 GCTTGGAAAGCTCTCCGGGTAGGATCAATCGGACGGCGGTCTGGATCTCTCGAGAAGAAA 510817 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| |||||| | |||| || ||||||| | ||| || |||| | Sbjct 510816 TCGTGGACTTCTTGTTGTACGAAGCCAACTTGCTGGCCTCGCCGGCGACTCGCTCGAAGA 510757 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || ||||| | || ||||| | |||||||||||| || |||||||| Sbjct 510756 TATCGTTGACGAAAGAGTTAAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 510697 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | ||||||||||| |||||||| ||| | |||||||| Sbjct 510696 GGACCTGCTTGAGGACCTTGTAAATGTAAGACGAGTA 510660 >seq60 Length=747880 Score = 114 bits (126), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || ||||| |||||||| || || | || Sbjct 527095 GCTTGGAGAGCTCTCCGGGGAGGATCAATCGAACGGCAGTCTGGATTTCTCGGGAAGAGA 527154 Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 |||| || |||| ||| |||| || |||||| | ||| || || | Sbjct 527155 TCGTCGACTTTTTGTTGTACGAA---GCCAACTTGCTGGCCTCACCGGCGACTCGCTCAA 527211 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || ||||| | || ||||| | |||||||||||| || ||||| Sbjct 527212 AGATGTCGTTGACGAAAGAGTTGAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGG 527271 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||| ||||||||||| |||||||||||| |||||||||| Sbjct 527272 GGTGGACCTGCTTGAGGACCTTGTAGATGTACGACGAGTA 527311 >seq58 Length=2575514 Score = 107 bits (118), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || |||||||||||||| || || | || Sbjct 1431451 GCTTGGAAAGCTCTCCGGGAAGGATCAATCGGACGGCGGTCTGGATTTCTCGGGAAGAGA 1431392 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||| | |||| || |||||| | ||| || |||| | Sbjct 1431391 TCGTTGACTTCTTGTTGTATGAAGCCAACTTGCTGGCCTCACCGGCGACTCGCTCGAAAA 1431332 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || ||||| | || ||||| | |||||||||||| || |||||||| Sbjct 1431331 TATCGTTGACGAAAGAGTTGAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 1431272 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | ||||||||||| |||||||| ||| | || ||||| Sbjct 1431271 GGACCTGCTTGAGGACCTTGTAAATGTAGGAAGAGTA 1431235 >seq73 Length=2505705 Score = 95.1 bits (104), Expect = 1e-13 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1630201 TTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGGCCTTC 1630260 |||||||| | |||||||||||||| || ||||| || ||||||||||| || ||| | Sbjct 803671 TTGGAGATCATGGCGCACTGTTTGAGAGTATCGTAAATACCCTCGATCGAATCATCCTGC 803612 Query 1630261 ATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCGGCGTTGAAGAGC 1630317 ||| |||| | ||||| ||||| || ||||| | || ||||||||||| ||| Sbjct 803611 ATGGCCACCAAGAAGCAAGACGAAAGCTGGGGGTGAGGAGTACCGGCGTTGAATAGC 803555 >seq144 Length=33835 Score = 91.5 bits (100), Expect = 2e-12 Identities = 115/154 (75%), Gaps = 8/154 (5%) Strand=Plus/Minus Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAG 869278 || |||||||| || |||||||||||||| ||||| | | ||| || || || ||| Sbjct 14179 CCAGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAG 14120 Query 869279 ATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG 869338 || ||||| ||||| || ||| ||| || |||||||||||| ||||||| || | | Sbjct 14119 ATACCCTCAACGGCAGCGAAGGCGACCAGTCGCTCGGCAAAG--GTCGAGG---TCTTGG 14065 Query 869339 TTG--ATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 | |||||||| | |||||||| ||||||| Sbjct 14064 ACGAAATCCACTTTAGAGCCCAGTC-ACCTTTTT 14032 >seq83 Length=2340728 Score = 87.8 bits (96), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 || || ||||| |||||||||||||| ||||| ||||||||| |||||||| || || Sbjct 1929651 CTGGGAGAGCCCTGCTTTGACAAGATGGAGGCTTTGCTCGCCCATGCCATGCTCTCCATT 1929592 Query 19158 CCGGCCACCAAGGGATTCGAGATTGG 19183 || ||||||||| ||||||||||| Sbjct 1929591 CCTTCCACCAAGGCTTTCGAGATTGG 1929566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107117370794322