Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq82 158 2e-32 seq58 149 1e-29 seq60 136 6e-26 >seq82 Length=1750706 Score = 158 bits (174), Expect = 2e-32 Identities = 189/254 (74%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||| || | |||||||||||| |||| |||||| ||| || || ||| | | || Sbjct 510912 ACTTGGTAACTGACTTGGTACCCTCCGAGATAGCGTGCTTGGAAAGCTCTCCGGGTAGGA 510853 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC- 1485591 ||| || ||||||||||||||||| || | |||||| |||||| || || Sbjct 510852 TCAATCGGACGGCGGTCTGGATCTCTCGAGAAGAAATCGTGGACTTCTTGTT-GTACGAA 510794 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| || ||||||| | ||| || |||| || |||||||| || ||||| | | Sbjct 510793 GCCAACTTGCTGGCCTCGCCGGCGACTCGCTCGAAGATATCGTTGACGAAAGAGTTAAGG 510734 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | ||||||||||| || ||||||||| ||||||||||| ||||||||| Sbjct 510733 ATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAA 510674 Query 1485712 ACAAAGGACGAGTA 1485725 | | |||||||| Sbjct 510673 ATGTAAGACGAGTA 510660 >seq58 Length=2575514 Score = 149 bits (164), Expect = 1e-29 Identities = 187/254 (74%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | |||||| ||||| || | ||||||| ||| || || ||| | | || Sbjct 1431487 ACTTGGTGACCGACTTGGTTCCCTCCGAAATGGCGTGCTTGGAAAGCTCTCCGGGAAGGA 1431428 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC- 1485591 ||| || |||||||||||||| || |||| |||||| |||||| || | Sbjct 1431427 TCAATCGGACGGCGGTCTGGATTTCTCGGGAAGAGATCGTTGACTTCTTGTT-GTATGAA 1431369 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| || |||||| | ||| || |||| || |||||||| || ||||| | | Sbjct 1431368 GCCAACTTGCTGGCCTCACCGGCGACTCGCTCGAAAATATCGTTGACGAAAGAGTTGAGG 1431309 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | ||||||||||| || ||||||||| ||||||||||| ||||||||| Sbjct 1431308 ATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAA 1431249 Query 1485712 ACAAAGGACGAGTA 1485725 | |||| ||||| Sbjct 1431248 ATGTAGGAAGAGTA 1431235 >seq60 Length=747880 Score = 136 bits (150), Expect = 6e-26 Identities = 183/252 (73%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||| || | |||||| ||||| |||| ||||||| ||| || || ||| | | |||| Sbjct 527061 TTGGTCACAGACTTGGTTCCCTCCGAGATGGCGTGCTTGGAGAGCTCTCCGGGGAGGATC 527120 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GC 1485593 | || ||||| |||||||| || |||| |||||| ||||| || || || Sbjct 527121 AATCGAACGGCAGTCTGGATTTCTCGGGAAGAGATCGTCGACTTTTTGTT-GTACGAAGC 527179 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || || |||||| | ||| || || | ||||||||||| || ||||| | ||| Sbjct 527180 CAACTTGCTGGCCTCACCGGCGACTCGCTCAAAGATGTCGTTGACGAAAGAGTTGAGGAT 527239 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||||| | ||||||||||| || ||||||||| ||||||||||| |||||||| | Sbjct 527240 AGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGAT 527299 Query 1485714 AAAGGACGAGTA 1485725 | |||||||| Sbjct 527300 GTACGACGAGTA 527311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916218104366774