Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq60 147 1e-30 seq83 93.3 3e-14 seq248 86.0 4e-12 >seq60 Length=747880 Score = 147 bits (162), Expect = 1e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||| | |||||| ||||| ||||| | |||| ||| ||||| ||||| || ||||| Sbjct 85650 TCCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGA 85709 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | || |||| || || ||||| ||||||||||| ||||| ||||| || | || Sbjct 85710 AAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGG 85769 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| | || || |||||| | || | ||| | ||| || Sbjct 85770 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCAC 85829 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCT 34973 |||| ||| |||||||| ||||||||||||||||| ||||||| Sbjct 85830 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 85873 >seq83 Length=2340728 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||| ||||| |||||||| ||| | || | || Sbjct 220701 AGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCC 220760 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| ||| ||||| || | || | |||||||| || Sbjct 220761 TCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCC 220820 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | || |||||| Sbjct 220821 TGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTC 220880 Query 34946 TTTCCCGTGAG 34956 |||||||| || Sbjct 220881 TTTCCCGTAAG 220891 Score = 84.2 bits (92), Expect = 1e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| |||||||| ||| | || | || || || |||||||||||||||| Sbjct 221090 CCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 221149 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||| || | || | |||||||| || | || || |||||| Sbjct 221150 TCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 221209 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 | || | || | ||| || || | || |||||||||||||| || Sbjct 221210 CGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221258 Score = 84.2 bits (92), Expect = 1e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| |||||||| ||| | || | || || || |||||||||||||||| Sbjct 221454 CCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 221513 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||| || | || | |||||||| || | || || |||||| Sbjct 221514 TCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 221573 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 | || | || | ||| || || | || |||||||||||||| || Sbjct 221574 CGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221622 >seq248 Length=2255592 Score = 86.0 bits (94), Expect = 4e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| |||||||| ||| | || | || || || |||||||||||||||| Sbjct 646050 CCTTCTGGATGTTGTAGTCCGAAAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 645991 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 | ||||| ||||| || | || | ||||||||||| Sbjct 645990 TGAGTCGCTGCTGATCAGGGGGAATTCCCTCCTTGTC 645954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691744144654