Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq60 114 3e-20 >seq60 Length=747880 Score = 114 bits (126), Expect = 3e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| ||| | || || | ||| || || || |||||||| || || ||||| || Sbjct 85651 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 85710 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| || || || || || || || || ||||| |||| || ||||| || || Sbjct 85711 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 85770 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || ||||| || || || || || || || ||| || || || Sbjct 85771 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 85830 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCT 82806 || | || || ||||| || || | |||||||| || |||| Sbjct 85831 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 85873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981823853810174