Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq82 122 1e-21 seq60 113 6e-19 seq58 113 6e-19 seq144 89.7 7e-12 seq73 89.7 7e-12 >seq82 Length=1750706 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||| | || |||||||| ||||||||||| |||||| || | | ||| Sbjct 510660 TACTCGTCTTACATTTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 510713 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || |||||||| || |||| || ||| | Sbjct 510714 TCCAACAAGGCCATGTCTATCCTTAACTCTTTCGTCAACGATATCTTCGAGCGAGTCGCC 510773 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||||| | |||| | ||||||| |||||| | || |||||| Sbjct 510774 GGCGAGGCCAGCAAGTTGGCTTCGTACAACAAGAAGTCCACGATTTCTTCTCGAGAGATC 510833 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| || ||||| | | ||| || || ||| |||||| |||| ||||| Sbjct 510834 CAGACCGCCGTCCGATTGATCCTACCCGGAGAGCTTTCCAAGCACGCTATCTCGGAGGGT 510893 Query 725139 ACCA 725142 |||| Sbjct 510894 ACCA 510897 >seq60 Length=747880 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||| | ||||||||||| ||||||||||| |||||| || | | ||| Sbjct 527311 TACTCGTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 527258 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || ||||||||||| | || || ||| | Sbjct 527257 TCCAACAAGGCCATGTCTATCCTCAACTCTTTCGTCAACGACATCTTTGAGCGAGTCGCC 527198 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||| | |||| | |||||| |||||| | || || ||| Sbjct 527197 GGTGAGGCCAGCAAGTTGGCTTCGTACAACAAAAAGTCGACGATCTCTTCCCGAGAAATC 527138 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| ||||| || ||||| | | ||| || || ||| ||||||| |||| ||||| Sbjct 527137 CAGACTGCCGTTCGATTGATCCTCCCCGGAGAGCTCTCCAAGCACGCCATCTCGGAGGGA 527078 Query 725139 ACCA 725142 |||| Sbjct 527077 ACCA 527074 >seq58 Length=2575514 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| || |||||||| ||||||||||| |||||| || | | ||| Sbjct 1431235 TACTCTTCCTACATTTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 1431288 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || |||||||| || |||| || ||| | Sbjct 1431289 TCCAACAAGGCCATGTCTATCCTCAACTCTTTCGTCAACGATATTTTCGAGCGAGTCGCC 1431348 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||| | |||| | ||||||| |||||| | || || ||| Sbjct 1431349 GGTGAGGCCAGCAAGTTGGCTTCATACAACAAGAAGTCAACGATCTCTTCCCGAGAAATC 1431408 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| || ||||| | | ||| || || ||| ||||||| | || ||||| Sbjct 1431409 CAGACCGCCGTCCGATTGATCCTTCCCGGAGAGCTTTCCAAGCACGCCATTTCGGAGGGA 1431468 Query 725139 ACCA 725142 |||| Sbjct 1431469 ACCA 1431472 >seq144 Length=33835 Score = 89.7 bits (98), Expect = 7e-12 Identities = 115/153 (75%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT--CAACAAGGAGGGCCTCGACACTTTGCCGA 1456180 ||||||| |||||||| | |||||||| | | | || ||||||| ||||||||| Sbjct 14032 AAAAAGGT-GACTGGGCTCTAAAGTGGATTTCGTCCAAGA---CCTCGAC-CTTTGCCGA 14086 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| || |||| ||| || || || ||||| ||||| || || || ||| | | || Sbjct 14087 GCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGGATCGTTCGCCTCGAT 14146 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| |||||||||||||| || |||||||| || Sbjct 14147 CTTCTGGCTCAAGAAGCGAGGACTCATGCCTGG 14179 >seq73 Length=2505705 Score = 89.7 bits (98), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 259930 GCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAA 259989 ||| || || ||||| || || | ||| ||| |||||| ||||| || ||| |||| | Sbjct 803555 GCTATTCAACGCCGGTACTCCTCACCCCCAGCTTTCGTCTTGCTTCTTGGTGGCCATGCA 803614 Query 259990 GGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAA 260046 || |||||||||||||| || || || || ||||| |||||||| | |||||||| Sbjct 803615 GGATGATTCGATCGAGGGTATTTACGATACTCTCAAACAGTGCGCCATGATCTCCAA 803671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177785543811092