Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq83 105 7e-18 seq60 96.9 4e-15 >seq83 Length=2340728 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| |||||| | ||||| || || || || ||||| || ||||||||||| Sbjct 220686 CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 220745 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| || || || || ||||| ||||||||||| || || Sbjct 220746 AGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGG 220805 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || ||||| || || || Sbjct 220806 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACC 220865 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 |||||||| ||||| || || || Sbjct 220866 TCGAGAGTGATGGTCTTTCCCGT 220888 >seq60 Length=747880 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| || || || |||||||| || || ||| | || ||| Sbjct 85669 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCG 85728 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || || | ||||||||||| || || || ||||| || || || Sbjct 85729 AGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGG 85788 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || ||||| || || || ||||| ||| Sbjct 85789 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTA 85848 Query 134685 CCGGTTAAAGTTTTAACGAAAAT 134707 || || | || || ||||| || Sbjct 85849 CCCGTGAGGGTCTTTACGAAGAT 85871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396719550320