Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq144 100 4e-16 >seq144 Length=33835 Score = 100 bits (110), Expect = 4e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||| | ||||| | |||||||| || || || |||||||| || Sbjct 14225 GTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTCAATCCAGGCATGAGTCC 14166 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| |||| || || ||||| |||||||| ||||| || Sbjct 14165 TCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAGATACCCTCAACGGC 14106 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206 ||||| || | || ||||| ||||||| || ||| | || |||||| | || Sbjct 14105 AGCGAAGGCGACCAGTCGCTCGGCAAAGGTCGAGGTCTTGGACGAAATCCACTTTAGAGC 14046 Query 130207 CCACTGCGCCTTTTTCTC-GATACACGGGACGGT 130239 ||| | | ||||||| || ||| || || || || Sbjct 14045 CCAGT-CACCTTTTTTTCGGATGCAGGGAACTGT 14013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433143702960