Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq60 132 1e-25 seq83 131 5e-25 >seq60 Length=747880 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || || || || || || || || || || || |||||||| || || || ||||| || Sbjct 85651 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 85710 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||||| ||||| || || || || || || ||||| || || ||||||||||| ||| Sbjct 85711 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 85770 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || ||||| || || || || || || || || | ||||| | || || Sbjct 85771 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 85830 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733 ||||| || | ||||| || || || || ||||| || |||| Sbjct 85831 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 85873 >seq83 Length=2340728 Score = 131 bits (144), Expect = 5e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 140500 TATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATAT 140559 || ||||| || || || | || ||||| |||||||| |||||||| || || || | Sbjct 220675 TAGTTTACTGCCCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGT 220734 Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619 | || || || | ||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 220735 TGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCT 220794 Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679 |||||||||| || || || |||||||| || || || || || || || || | ||| | Sbjct 220795 GATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGG 220854 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 ||| ||||| || || || | |||||||| || || Sbjct 220855 ATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 220891 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | ||||| || || ||||| || ||||| || ||||| Sbjct 221092 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221151 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || |||||||||||||| || || || |||||||| || || || || || || || Sbjct 221152 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221211 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || | ||| |||| ||||| || || || | |||||||| || || Sbjct 221212 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221258 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | ||||| || || ||||| || ||||| || ||||| Sbjct 221456 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221515 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || |||||||||||||| || || || |||||||| || || || || || || || Sbjct 221516 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221575 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || | ||| |||| ||||| || || || | |||||||| || || Sbjct 221576 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249235823598