Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq144 86.0 7e-12 seq73 84.2 2e-11 >seq144 Length=33835 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 ||| || || |||||||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 14108 CGTTGAGGGTATCTTCTTTTCTGGATCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGAGG 14167 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||||| || ||| || || || ||| |||| || |||||||||| || || Sbjct 14168 ACTCATGCCTGGATTGACGTTTTCGAATGAGTTGATCTCGAGGGACGAGGGTCTTCA 14224 >seq73 Length=2505705 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 79672 TTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTC 79731 |||||||| ||||||| ||||| || ||||| || ||||||||||| || |||| | Sbjct 803671 TTGGAGATCATGGCGCACTGTTTGAGAGTATCGTAAATACCCTCGATCGAATCATCCTGC 803612 Query 79732 ATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAG 79787 || || |||| |||||| ||| | ||| |||| |||||||||||||| || Sbjct 803611 ATGGCCACCAAGAAGCAAGACGAAAGCTGGGGGTGAGGAGTACCGGCGTTGAATAG 803556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522976155040