Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq60 205 2e-47 seq83 150 4e-31 seq248 96.9 8e-15 >seq60 Length=747880 Score = 205 bits (226), Expect = 2e-47 Identities = 169/206 (82%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959 || ||||| ||||| || ||||||||||| |||||||| ||||||| |||||| | ||| Sbjct 85663 CTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCA 85722 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 || || |||||||| || ||||||||||| || || || ||||| |||| |||||||||| Sbjct 85723 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTG 85782 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 ||||||||||| || ||||| |||||||||||||| || ||||| || ||||| Sbjct 85783 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 85842 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| |||||||| |||||||| || Sbjct 85843 GTCTTACCCGTGAGGGTCTTTACGAA 85868 >seq83 Length=2340728 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || |||| || || || ||||| || ||||| || |||||||| || |||| ||||| Sbjct 220692 CGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTT 220751 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||| || || |||||||| || |||||||| | || || || |||||||| | || Sbjct 220752 CGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCC 220811 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||||||||| || ||||| ||||| || || || |||||||||||| Sbjct 220812 TCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGA 220871 Query 211074 GTGATCGTCTTTCCCGTGAGA 211094 ||||| ||||||||||| ||| Sbjct 220872 GTGATGGTCTTTCCCGTAAGA 220892 Score = 132 bits (146), Expect = 1e-25 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| ||||| | ||| || || |||||||| || |||||||| Sbjct 221092 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221151 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || |||||||| | || ||||| ||||||||||| || ||||| ||| Sbjct 221152 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221211 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || || || || ||||||||||||||||| ||||||||||| ||| Sbjct 221212 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAGA 221259 Score = 132 bits (146), Expect = 1e-25 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| ||||| | ||| || || |||||||| || |||||||| Sbjct 221456 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221515 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || |||||||| | || ||||| ||||||||||| || ||||| ||| Sbjct 221516 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221575 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || || || || ||||||||||||||||| ||||||||||| ||| Sbjct 221576 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAGA 221623 >seq248 Length=2255592 Score = 96.9 bits (106), Expect = 8e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| |||||| | ||| || || |||||||| || |||||||| Sbjct 646048 TTCTGGATGTTGTAGTCCGAAAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATG 645989 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029 || || || || ||||| |||| ||| ||||||||||| |||| Sbjct 645988 AGTCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGAATCT 645946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148049465090