Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq60 98.7 7e-16 >seq60 Length=747880 Score = 98.7 bits (108), Expect = 7e-16 Identities = 171/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 23615 AGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACA 23674 |||| ||||| || ||||||||||| || || ||||| || || || || || | |||| Sbjct 85873 AGATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACA 85814 Query 23675 CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGC 23734 | | || | | || || || ||||| ||||| | || || ||||| |||| Sbjct 85813 CCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGC 85754 Query 23735 GTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTACAACAT 23792 | | || || ||||| || || || || || | || || ||| || |||||||||| Sbjct 85753 GACTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGG--ATTACAACAT 85696 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATC--AGCAGTTAAA 23850 || ||||||||||| | || | || | ||||||||||||||| | || || ||| Sbjct 85695 CCAGAAAGAGTCCACCCTCCACCTCGTCCTTAGGTTGCGAGGAGGAGCCAAGAAGCGAAA 85636 Query 23851 GATGAA 23856 || ||| Sbjct 85635 GAAGAA 85630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008504215128