Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq60 150 4e-31 seq83 136 8e-27 >seq60 Length=747880 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||| | ||| || || || | ||| ||||| ||||||||||| || | | Sbjct 85651 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 85710 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || ||||| ||||| | || || || ||| ||| Sbjct 85711 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 85770 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | ||||| ||||| |||| || || Sbjct 85771 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 85830 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCT 283095 || || ||||| ||||||||||| | ||||| ||||| |||| Sbjct 85831 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 85873 >seq83 Length=2340728 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || ||||| || ||||| | || || || |||||||||||||| | Sbjct 220686 CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 220745 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || ||||| |||||||| || || || ||| || Sbjct 220746 AGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGG 220805 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || |||||||| || || ||| | |||||||| || || | || || Sbjct 220806 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACC 220865 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||||||||| ||||| ||||| Sbjct 220866 TCGAGAGTGATGGTCTTTCCCGT 220888 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || || || ||||| || || || ||||| |||||| Sbjct 221092 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221151 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || || || ||| || ||||||||||| || |||||||| || || ||| | ||| Sbjct 221152 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221211 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||| || || | || || ||||||||||| ||||| ||||| Sbjct 221212 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGT 221255 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || || || ||||| || || || ||||| |||||| Sbjct 221456 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 221515 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || || || ||| || ||||||||||| || |||||||| || || ||| | ||| Sbjct 221516 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 221575 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||| || || | || || ||||||||||| ||||| ||||| Sbjct 221576 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGT 221619 Score = 87.8 bits (96), Expect = 4e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 315650 TGTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGA 315709 ||||| |||| || | ||| || || |||| | |||||| ||||| | || ||| Sbjct 1302690 TGTGAGTAATGACGAGCACTCCTCCCTCGAAGTCCTTAAGGGCCTCGATAAGAGCGGCGA 1302749 Query 315710 GACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCC 315769 | ||| ||||||| |||| ||||||||||| | | ||||||||||||| || ||| Sbjct 1302750 GGGACTCTCGGTCCAAGTAGTTCGTCGGCTCATCCAACATGATGACGTGGGGTCGTCGCC 1302809 Query 315770 ATAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATG 315825 | ||||| || | ||||| ||| | ||||| || || || || || || ||| Sbjct 1302810 AGGTGGCGGCTCCAAGAACGACCTTGACCTTTTGTCCTCCGGAGAGACCTCGCATG 1302865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735632581964