Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq60 122 6e-23 seq83 102 6e-17 >seq60 Length=747880 Score = 122 bits (134), Expect = 6e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| || || | || ||||| || ||| ||| || |||||||||||||| | Sbjct 85650 TCCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGA 85709 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || || | || || |||||||| ||||| ||||| | ||||||||||| | || Sbjct 85710 AAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGG 85769 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| ||| | | | |||||||| | || ||||| Sbjct 85770 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCAC 85829 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331 ||| | || || ||||| |||||||||||||| |||||||| Sbjct 85830 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGAT 85871 >seq83 Length=2340728 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||| |||| | || || ||||| || |||||| ||||||||||| || | Sbjct 220686 CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 220745 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || |||| || |||||||| ||||| |||||||| ||||||||||| | ||| Sbjct 220746 AGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGG 220805 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| ||||| ||| | | | || || |||| || || ||| Sbjct 220806 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACC 220865 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAG 44316 || | || || ||||||||||| || Sbjct 220866 TCGAGAGTGATGGTCTTTCCCGTAAG 220891 Score = 93.3 bits (102), Expect = 3e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| || | || || |||| || |||||||| ||||| |||| Sbjct 221090 CCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 221149 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 |||| ||||||||||| | ||| | ||| ||||| ||| ||||| ||| | | Sbjct 221150 TCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 221209 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | || || |||| || || ||||| | || || ||||||||||| || Sbjct 221210 CGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221258 Score = 93.3 bits (102), Expect = 3e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| || | || || |||| || |||||||| ||||| |||| Sbjct 221454 CCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 221513 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 |||| ||||||||||| | ||| | ||| ||||| ||| ||||| ||| | | Sbjct 221514 TCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 221573 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | || || |||| || || ||||| | || || ||||||||||| || Sbjct 221574 CGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 221622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989232956122