Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq60 113 4e-20 >seq60 Length=747880 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || || ||| ||| ||||| ||||| || || || ||||| || | || ||| Sbjct 85669 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCG 85728 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| |||||||| || || ||||| || || | ||||| | ||||||||| || Sbjct 85729 AGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCC-TG 85787 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | ||| | | | ||||| ||||||||||| | || || || || Sbjct 85788 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTT 85847 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCT 41858 |||||| || ||||||||||| |||| Sbjct 85848 ACCCGTGAGGGTCTTTACGAAGATCT 85873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302462839200