Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 8e-16 >seq19 Length=309173 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| ||||||| ||| || || | || | ||||||||||| || ||||| || |||| Sbjct 224966 TCCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 224907 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 |||||| || | ||||| ||||| || || || | ||||||| |||||| || ||| Sbjct 224906 AAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGG 224847 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| |||||| || || | | ||| || ||| | |||| Sbjct 224846 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCAC 224787 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATAT 21169 || | ||| |||||||| || || | || || || || || Sbjct 224786 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGAT 224745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258978709788