Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq13 111 2e-19 >seq13 Length=590245 Score = 111 bits (122), Expect = 2e-19 Identities = 156/216 (72%), Gaps = 10/216 (5%) Strand=Plus/Plus Query 33579 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTG 33638 |||||| | | ||| ||| ||||||||||| || || || || || |||||||| Sbjct 19598 AAACATAC--AGTCGGTGTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTC 19655 Query 33639 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAG 33698 | ||| ||||| || || ||||| || ||||| || || || ||||| ||||| |||||| Sbjct 19656 AATCCAGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAG 19715 Query 33699 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG- 33757 ||||| || || || ||||| ||||| | |||| ||| | || | || ||| || Sbjct 19716 AAGATACCCTCAACGGCAGCGAAGGCGACCAGTCGCTCGGC--AAAGGTCGAGGTCTTGG 19773 Query 33758 ----TATCCACTTTTGAGCCCAATCGGCCTTCTTTT 33789 ||||||||| ||||||| || |||| |||| Sbjct 19774 ACGAAATCCACTTTAGAGCCCAGTC-ACCTTTTTTT 19808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817261473040