Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13 102 1e-16 >seq13 Length=590245 Score = 102 bits (112), Expect = 1e-16 Identities = 154/216 (71%), Gaps = 10/216 (5%) Strand=Plus/Plus Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016 |||||| | | ||| ||| ||||||||||| || || | || || |||||||| Sbjct 19598 AAACATAC--AGTCGGTGTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTC 19655 Query 50017 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAG 50076 | ||| ||||| || || ||||| || ||||| || || || || || || ||||||||| Sbjct 19656 AATCCAGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAG 19715 Query 50077 AAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATG- 50135 ||||| || || || || || ||||| || |||| ||| | || | || ||| || Sbjct 19716 AAGATACCCTCAACGGCAGCGAAGGCGACCAGTCGCTCGGC--AAAGGTCGAGGTCTTGG 19773 Query 50136 ----TATCCACTTTTGAGCCCAATCGGCCTTCTTTT 50167 ||||||||| ||||||| || |||| |||| Sbjct 19774 ACGAAATCCACTTTAGAGCCCAGTC-ACCTTTTTTT 19808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268413930520