Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 8e-16 >seq19 Length=309173 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||||||| | || | || || ||| |||||| || ||||||||||| | Sbjct 224965 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 224906 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| | ||||| |||||||||||| || | || | ||||||||||| || Sbjct 224905 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 224846 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||||||| || || ||||| | | || ||||| || | ||||||| Sbjct 224845 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG--ATGGTGTCAGAAGACTCCA 224788 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCT 48722 ||| | || ||||| ||||| ||||| || || || || |||| Sbjct 224787 CCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 224743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250979238043