Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq19 105 6e-18 seq6 82.4 6e-11 >seq19 Length=309173 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 || || || || || | || ||||| || |||| ||||| ||||| | | || ||| Sbjct 224745 ATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACC 224804 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | ||| | |||| || || || |||||||| || ||||| || ||||| || || Sbjct 224805 ATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGCGA 224864 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 ||||| || ||||| || ||| | |||||| ||| ||| | || ||||||||||| || Sbjct 224865 CTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGGATTACAACATCCAG 224924 Query 22405 AAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||| | || | || | | ||||| ||||| Sbjct 224925 AAGGAGTCCACCCTCCACCTCGTCCTTAGGTTGCGAGGAGG 224965 >seq6 Length=1120801 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || ||||||| || || || | ||||||| | ||| | |||| Sbjct 511850 ACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAGGCC 511909 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || ||||||||||| || || ||||| || || | || || ||||| || Sbjct 511910 AAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGAAAG 511969 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || ||| | || || |||||||| || || || || ||| | ||| Sbjct 511970 CAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCTTCAT 512029 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 | ||| | ||| | || ||||| Sbjct 512030 CTCGTTCTTCGACTCCGAGGAGG 512052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727780036295