Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19 172 1e-37 seq3 89.7 9e-13 seq5 84.2 4e-11 >seq19 Length=309173 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || |||||||| || |||||||| ||||| || || || | ||||| || | ||| Sbjct 224942 GTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTG 224883 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| |||||||| || |||| || || || || ||||| ||||||||||| || ||||| Sbjct 224882 CTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTT 224823 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||||||| ||||||||||| | || || || || | ||||||||| || ||||| Sbjct 224822 GGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGT 224763 Query 68438 GAGGGTCTTGACGAATATCT 68457 ||||||||| ||||| |||| Sbjct 224762 GAGGGTCTTTACGAAGATCT 224743 >seq3 Length=1532821 Score = 89.7 bits (98), Expect = 9e-13 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCG--GATGAAAGCGCGCC 224505 |||||| ||| || | || || || |||| || |||||| ||| ||| ||| | Sbjct 512318 TGTGAGTAATGACGAGCACTCCTCCCTCGAAGTCCTTAAGGGCCTCGAT--AAGAGCGGC 512375 Query 224506 AAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTG 224565 || ||||| ||||| | | |||||||||||||||||| ||||| |||||||| | | Sbjct 512376 GAGGGACTCTCGGTCCAAGTAGTTCGTCGGCTCATCCAACATGATGACGTGGGGTCGTCG 512435 Query 224566 CCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCG 224625 ||| ||| || |||| || | ||| ||||| || || || ||||| || || || Sbjct 512436 CCAGGTGGCGGCTCCAAGAACGACCTTGACCTTTTGTCCTCCGGAGAGACCTCGCATGGT 512495 Query 224626 CGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655 ||| | ||||| |||| || ||||| Sbjct 512496 GTTGTGCGAGGTGAACTCGGCCTCGAGACC 512525 >seq5 Length=1443891 Score = 84.2 bits (92), Expect = 4e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||| ||| ||||||||| ||||||||||| | || || || || | ||||||||| | Sbjct 854904 GAACCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCT 854963 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||||||||||||| |||||||| Sbjct 854964 TCCCTGTAAGGGTCTTGACGAAGATCTGCAT 854994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621904627960