Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq19 96.9 4e-15 >seq19 Length=309173 Score = 96.9 bits (106), Expect = 4e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | || || || | || || ||||||||||| ||||| Sbjct 224930 CTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAA 224871 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || ||||||||||| || | || | | ||||||||| ||| || |||| ||| Sbjct 224870 GATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 224812 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | |||||||| || ||||| || ||||||| Sbjct 224811 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTA 224752 Query 42196 CAAAGAT 42202 | ||||| Sbjct 224751 CGAAGAT 224745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212508023120