Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 1e-13 seq6 91.5 1e-13 >seq19 Length=309173 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | || || ||| || ||||| || || Sbjct 224935 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCG 224876 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||||||| || || || || ||||||||| ||| || |||| Sbjct 224875 GCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 224816 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||| || || | ||| | || || || || || || Sbjct 224815 ACGTTG-TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTGAGGGT 224757 Query 127096 TTTTACAAAAATCT 127109 ||||| || |||| Sbjct 224756 CTTTACGAAGATCT 224743 >seq6 Length=1120801 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 126872 ATTTACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGA 126931 || || | |||||| || || || | ||| | || | ||| | |||||||| || || Sbjct 512066 ATCTAGTTTACTGC-CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGG 512008 Query 126932 ATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGC 126991 || ||||| || || || || || || ||||| ||||| ||| ||||||||||| Sbjct 512007 ATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGC 511948 Query 126992 TGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGT 127042 |||||||| ||||| || |||||||| ||| ||| || ||||| ||||| Sbjct 511947 TGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 511896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500544418320