Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13 100 3e-16 >seq13 Length=590245 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||||||||| | ||||| | |||||||| || || || |||||||| || Sbjct 19613 GTGAAGACCCTCGTCCCTCGAGATCAACTCATTCGAAAACGTCAATCCAGGCATGAGTCC 19672 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| |||| || || ||||| |||||||| ||||| || Sbjct 19673 TCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAGATACCCTCAACGGC 19732 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 ||||| || | || ||||||||||||| || ||| | || |||||| | || Sbjct 19733 AGCGAAGGCGACCAGTCGCTCGGCAAAGGTCGAGGTCTTGGACGAAATCCACTTTAGAGC 19792 Query 127711 CCACTGTGCCTTTTTCTC-GATACATGGGACGGT 127743 ||| | ||||||| || ||| || || || || Sbjct 19793 CCAGT-CACCTTTTTTTCGGATGCAGGGAACTGT 19825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506870239880