Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 seq13 122 1e-22 >seq2 Length=2005798 Score = 134 bits (148), Expect = 2e-26 Identities = 278/410 (68%), Gaps = 8/410 (2%) Strand=Plus/Plus Query 112570 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCC 112629 ||||||| || ||||| || || || ||| ||||||| || | ||||||||||| | Sbjct 806790 ACCCCGTGAAGGAAGCTCGAAACTCAAACATGCGACACCGACCTGTAGGTCTCGGTGTTC 806849 Query 112630 AAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAG 112688 |||||||||| |||| ||||| | ||| | || ||| || || || || ||| Sbjct 806850 AAGGTCTCGCTGATGCGTTCATGATCCTTCGA-ATGCCTTTCGAGTCTCCAGAGGCCAAG 806908 Query 112689 GAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAG 112748 |||| | || |||||||| || ||||||||||||||||| | || ||| Sbjct 806909 CTTCTCAACATCCAGATCTTTGAGACCATTTATCACGCCGCTCTTGAATCTTCTTGCGAG 806968 Query 112749 TTGGCAGAGGTTGATGGTCCATATGAAACCTTT---GAGGGTTCTCCAGCTTCACAAGGG 112805 |||| | | |||||| | || |||| | ||||||||||| | || | || Sbjct 806969 ATGGCTGCCATCGATGGTGCCTAC---ACCTCTTACGAGGGTTCTCCTGTCTCTAAGGGA 807025 Query 112806 GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTC 112865 | ||||||||||||||||||| | ||| | | | || | || |||| || ||| Sbjct 807026 GAACTTCAATTTGATATGTGGGGTGTCGAGCCGACGGGTCTTTGGGATTGGGCCGAGCTC 807085 Query 112866 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 112925 ||||| ||||||| | || | | ||| | ||| | || || ||||| ||| Sbjct 807086 AAGGAGAAGATCAAGGTACATGGAGTCAGGAACTCATTGTTGGTCGCGCCCATGCCGACA 807145 Query 112926 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 || || ||| | |||||| | ||| || ||||||||||| || ||||| Sbjct 807146 GCTTCAACCTCCCAAATCCTTGGTTTCAACGAATGCTTTGAGCCTTACAC 807195 >seq13 Length=590245 Score = 122 bits (134), Expect = 1e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTC 102166 |||||||| || || | ||| |||| || |||||| | |||||| ||| | ||| | Sbjct 19825 ACAGTTCCCTGCATCCGAAAAAAAGGTGACTGGGCTCTAAAGTGGATTTCGTCCAAGACC 19766 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || ||||||| |||||||| |||| || || ||||||||||||||||| ||||| Sbjct 19765 TCGA-CCTTTGCCGAGCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGG 19707 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || ||| | | || | ||||||||||||||||| |||||||| || | || || Sbjct 19706 ATCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGAGGACTCATGCCTGGATTGACGTTTTC 19647 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || ||| | ||||| | |||||||| || ||| Sbjct 19646 GAATGAGTTGATCTCGAGGGACGAGGGTCTTCAC 19613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742066350960