Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 1e-12 >seq19 Length=309173 Score = 91.5 bits (100), Expect = 1e-12 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | || |||| | ||| || || ||||| || || || ||||| || || Sbjct 224917 TTGTAATCCGAAAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGC 224858 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||||||||||||||| || ||||| ||||| || || || ||| Sbjct 224857 TGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCA 224798 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | | | |||||||| || || ||||| ||||| ||||| ||||| || Sbjct 224797 GAAGACTCCA-CCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGAT 224745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177355521364